Salmo salar (Atlantic salmon): 106588736
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Entry
106588736 CDS
T04363
Name
(RefSeq) sorting nexin-13-like
KO
K17925
sorting nexin-13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
106588736
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
106588736
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
106588736
NCBI-ProteinID:
XP_014033487
UniProt:
A0A1S3Q0M5
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Position
ssa27:complement(24001688..24036244)
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AA seq
1028 aa
AA seq
DB search
MSNDVANRRISSAQLIQASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVT
LLFGKTNSERHLEKCEHSYLPATQTGILKTLDEMRLEQKPIKIDRRLTGSNYIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLERRDDNKQRDLEEMVESFFEAEVEMERNVCRDVVCTSLKDEEGFLRDL
CEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNY
EAFMNILKLTDKVSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETR
IQRLQSGKEVDTLKLAANFGKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLTVE
GYRVTAQQQLEVMEGWQKDGKKGGSTKGLLKAAALGVYEQYLSDKASPRVQVDEVSVVKL
REKLQKEGDPTPEIFDDIQRKVYDMMLRDDRYYPSFRQSPLYIRMLAELDMLKEPSYRGS
DDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFISDTDMCGYNSSGLKSVTLSKCL
DAVRSLDAVLSPNTTRRQSIADACLPGAGLGMGLGLLGATGVCNDHGKTYALYAITVCRR
NHDGSEDSWKTYRRYSDFHDFHMRITEQVKFENLTSILKLPGKKTFNNMDRDFLEKRKKD
LNAYLQLLLNPEMVKACPTLVPYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSN
AVKRLPDSLAEGMNTAADNMGRMSEKLGQDIKQSMFKVPPLLPKSDIDPEHCRVSAQLDD
NVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMT
APEQVADYVKKFRDSYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGAD
TTRKGILRVFDMFQHGPMNRRLVYVLLEGFLETMFPQYKFPELFVKLHSRSPRTARYTQK
LKSTSLKR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacgttgctaacaggagaatctcttcagctcaactgattcaggccagtctg
tctgtttggggatgggggggtctaggagtggtgctgttcctcatcactttcggacccttc
gctatcttctacctggccttctatatctgctgcgttgtaggcggtggttttgcggtcact
ctgttgtttgggaagactaactcagagagacatctagagaagtgtgaacactcctacctg
ccagccacgcaaacgggtatactgaagacgttggatgagatgaggttggagcagaagcct
ataaagatagacaggagactgactggctccaactacatagacgagcctctgcaacaggtc
atccagtttgcattgagagattatattcagtattggtattacactctgagtgaggatgag
tctttcctgctggaaatcagacagactgtccagaacgctctggtccagttctctacacgg
tctaaagaggtggactggcagccttatttcaccaccagactggtggatgacttcgctact
cacctccgagtcttcagaaaggcccaggacagactggagcgcagggatgacaataaacag
agggacttggaggagatggtggagtcattctttgaggcggaggtagagatggagaggaac
gtctgcagagacgtggtctgcacctccctgaaggatgaagaagggttcctaagggacttg
tgtgaggtgctgctctaccttttactacctcctggagacttccacaacaagaacatgaga
tacttccttagggagattctggctcgcggcgttctccttcccctggtcaaccagctgagt
gatcctgattacatcaaccagttcgttatctggatgatccgggactctagctgtaactac
gaggcatttatgaacatcttgaagctgacagacaaagtgtctgagctggaggctgttaaa
gacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagacgatatc
aatgttataaagaatcagatcaacagtctgttgtttgtgaagaaggtctgtgagaccagg
atacagaggctacagtcagggaaggaagtagatactctaaaactagcagctaatttcggc
aagctgtgcatcataccgctggaacacatccttgttcacaacatcgccttgcaattcttt
atggactacatgcaggcggctggggcccaggcagagctgttcttctggctgacagtagag
ggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaaggatgga
aagaagggaggttctactaaaggactgctgaaggctgcagcactaggggtctatgaacag
tacctgtctgataaggcgtcccccagggtgcaggtagatgaggtgtctgtagtcaaactg
agagagaagctacagaaggaaggcgaccccacgccagagatattcgacgacatccagaga
aaagtgtatgacatgatgcttcgtgatgacaggtactacccgtcgttcagacagagtccc
ctctacatcaggatgttagctgaactggacatgctgaaagaaccctcttatagaggatca
gatgacggagatggagaatcgttcaacggttctccaacaggaagcattaatctgtctctg
gatgacctttcgaattcctgccatgacgacaatatacagctacacgccttcatctctgac
acagatatgtgtgggtacaacagtagtggccttaaaagcgttaccctgtcaaaatgcctt
gatgctgtaaggagcctagatgcagtgttgtctcctaacactacaagacggcagtccata
gctgatgcttgtctccccggggctgggttgggtatggggttggggctgctgggtgctaca
ggggtgtgtaacgaccacggcaagacctacgccctctacgccatcaccgtgtgccgccgt
aaccacgacggcagcgaggactcctggaaaacctaccgccgctactccgacttccacgac
ttccacatgaggatcacggagcaggtaaagtttgagaacttgacgtcgatcctgaagctg
ccagggaagaagacgttcaacaacatggacagagacttcctggagaagaggaaaaaagat
ctcaacgcatacctacagctgctgctgaatccagagatggtgaaggcctgtcctactctc
gtcccatatgtctatgacttcctggagaataagcaatacagcaagggcaagggagacttc
gcacgcaagatggatacgtttgtgaacccgctgcgtagctcgatgcgtaacgtgtcgaac
gcagtgaagagactgccagatagtctggctgaagggatgaacactgctgctgacaacatg
ggacgcatgtcagagaaactgggacaggacatcaaacagtccatgttcaaggtgccccca
ctgctccccaagtctgacattgacccagagcactgccgggtctcggcccagctggacgac
aacgtggatgataacatccctctgcgtgtgatgctgctgctgatggatgaggtgtttgac
ctgaaggagaggaaccagtggcttcgcaggaacatcaagaaccttctgcagcaactcatc
agagccacatacggagacactatcaacaggaagattgttgatcatgtggacttcatgaca
gctccagaacaggtggcagactacgtcaagaagttcagggattcatactggcccaacgga
atcctagcagagtctccgccccgccgggacaagaacatccgcatgaggacacgggtcgcc
gccaagaccaacctattgggaatcatgccagatgagttgaagcacatcataggggcggat
acgactcgtaaaggcatccttcgtgtgtttgacatgttccaacacggaccaatgaatcgt
cggctggtctacgtgctcctagaaggattcctggagaccatgttccctcagtacaagttc
ccagagctgtttgtcaaactgcactcccgttcgccgcgcacagctagatacacacagaaa
cttaagagcacctccctgaagaggtga
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