Salmo salar (Atlantic salmon): 106588737
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Entry
106588737 CDS
T04363
Symbol
clasp2
Name
(RefSeq) cytoplasmic linker associated protein 2
KO
K16578
CLIP-associating protein 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106588737 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106588737 (clasp2)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106588737 (clasp2)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106588737 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
Cnd1
TOR1L1_N
ParcG
HEAT_DAAF5
IFRD
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
106588737
NCBI-ProteinID:
XP_014033496
UniProt:
A0A1S3Q0U0
LinkDB
All DBs
Position
ssa27:complement(23396037..23478915)
Genome browser
AA seq
1550 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPQRSSDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVREQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQPLSLSKIVPYLCSLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHD
HSFEDDVDSTDGNRAQAAFKVPKIPKKPAESSTARRPSATGPKIGGASKDGAGGIDEEDF
IKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
FQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADTLFNSLEPSYQRSLQSSLRN
AGSVASLPQSDRSSSSSQESLNRPLSSKWSAVPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHIGQVGAGRLTPGSYSSLDDASDKMDGARSVNGRLRTKQPLTTATSVSQVDSR
GRTRTKMVSQSQRSDESDCTPGSQSATPIGAGSRSGSPGRVLTSTALSTLGSGAQRVLAG
TGGRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNGASRGARGSRIPRPSMSQGCSREAS
RESSRDTSPARSFTPLASRHYSRSTGALHTADALGAAGSGYSISQSSRLSSSVSAMRILN
TGSDVEEALADALLLGDMRSKKKPARRRYENYGMYSDDDANSDASSACSERSYSSRNGGA
IPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFA
DPHSKRESGSRVYGTAESGISSASFKRVFSMFLETLVDFVLVHREDLQDWLFVLLTQLLK
KMGADLLGSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAVLKYIETL
TLQMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTMLLAAL
PKTFQDGATKLLQNHLRNTGNAAQAPTGSPLTRHTPRSPASWSSPLTSPTNTSQNTSSPS
AFDYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDMNEPVRRREGEEGGSAGADQVDGGR
TALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSVIDTSLDESDQQTDDSSIDQSELVSE
LLKELSNHNERVEERKAALCELLKLIRENTLQVSWDEHFKTILLLLLETLGDREHVIRAL
ALRVLREILSRQPWRFKNYAELTIMKALEAHKDPHKEVVRAAEETAAMLASSISPDQCIK
VLCPIIQSADYPINLAAIKMQTKVIERVPHEGLVSMLPEIVPGLIQGYDNSESSVRKACV
FCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKRAQSGSSGGEPPADSL
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacctcatagactacctgaacgacccgcagaggtcctcc
gatgtggagcaagacaaaccacggttggataaaaccgtagacgagctgacgggatgggtc
aactccagcaactacaaggtggcgttgttggggatagacattgccggggcgtttgtcgat
cgcttgggggagcgcttcagaggatacctgggaacagtggtccctgcgttagtggacagg
ttgggggacagtaaggaccaggtcagagaacagagtcaaactgtcatcctccgctgtatg
gaagtcacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aatttccgcagcagagagggggtgtgtctggttctctgcgccaccctcaacacgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcagtctgacaggagatcag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgacctgggaaagagaggcctgcctgccacacggttacagacaata
tacggccgttttgatgaagcattgaattctgggaacatggcgctcagccccagtcacgac
catagttttgaggatgatgtggacagtacggatgggaaccgtgctcaggctgccttcaaa
gtccccaaaatccccaagaagccggcagagtcctctactgcacgcagacccagcgctaca
ggacccaagatcggaggtgcgtctaaggatggagctgggggcatcgatgaggaagacttc
atcaaagccttcactgacgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaataagatcagggagatctgttctgatgataaacatgactgggaccagagagct
gccgcaatgaagaagatccgctcgctgattgttgccggggcaacggagtacgagtgtttc
ttccaacacctgaggctgttggacggagcattcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggcccacctgtcaacagtgttgggtaataag
tttgaccatggggccgagggcattcttcctgtcctgttcaacctcatccctaactgtgcc
aaggttatggccacttcaggggtgtctgctatacgcttcatcataaggcacacacacgtt
cccagactcattcccctgatcaccagtaactgcacctgcaagtctgtggccgtcagaagg
aaatgttttgacttcttggacctgctgctgcaggagtggcagacccagactctagagaga
catacagcagtgatggtagcgagcattaagaaggggattgcagatgccgacgcagaggcc
agagtagaggcccgcaaggcgtactggggtctgaggaaccattttccgggagaggcggac
actctgttcaactcgttagaaccgtcctatcagaggagcctccagtcgtctctcaggaat
gccgggagcgtggcgtctcttcctcagagcgaccgctcctcttcctcttcacaggagagc
ctcaatcgtcctctgtcgtctaaatggtcagctgttcctggtagagtcccggctggtcat
aagggcggggcgtcgccaggctccctgcagcgttcccgtagcgatgtggatgttaatgca
gcaacagttgctaagcagcggcacatcgggcaggtgggggcggggagactgacccccggc
tcctactcgtcattggatgatgcctctgataaaatggatggggccaggtcagtcaatggt
cgtctgaggaccaagcagcctctcaccacggcaaccagcgtcagccaggtggactcccgg
ggacgcacccgcaccaagatggtgtcccagtcacaacgttccgacgaatcagattgcacg
ccaggatctcagtctgctacccccattggtgccggcagtcggagtggttcccctggccgt
gtcctgaccagcacagctctgagtacgctgggttctggagcccagagggtcctagctggg
acagggggaagacgtagccgcatcccccgcagccagggctgctcacgagactcctcccct
acacgcctgtctgtcgctccctccagtattagttccatctacaacggcgcaagcagagga
gctcggggtagtcgtatcccccggcccagtatgagtcagggctgcagcagggaggccagc
agagagagcagcagagacaccagccctgcacgctcctttacacccctggcgtcgcggcac
tactctcgctccactggagctctccataccgccgacgctttaggggccgcagggtcaggg
tacagtatcagtcagtccagtcgtctgtcctcatccgtcagcgccatgagaatcctcaac
acaggatctgatgtagaagaggcgctcgctgacgccctgctgttgggagacatgagatcc
aagaagaagccagcgcggcggcgctatgagaactatgggatgtattcggatgatgatgct
aacagtgatgcgtccagcgcctgctcagagcgctcctacagctccaggaacggaggagcc
atccccacgtacatgagacagactgaggacgtggctgaggtgttgaaccgctgtgccagt
gccaattggtcggagaggaaggaggggcttctgggtctacaggctctactgaagaaccaa
cgcaccctcagtcgtgtggagttgaagaggttgtgtgagatcttcaccaggatgtttgca
gacccccacagtaagcgagaatccggatctagggtctatggaacggcagaatccggtata
agctcagcctccttcaagagagtgttcagtatgttcttagagaccctagtggactttgtc
ctggtgcatagagaagacctgcaggactggctgtttgtcctgctcacccagctgctgaag
aagatgggagctgacctactgggatcagtacaggccaaggtccagagagcactggacatc
acacgagagtctttccccaacgacctccagttcactatcctcatgaggttcactgtggac
cagactcagacacccaacctcaaggtgaaggtggctgttctgaagtacattgagaccttg
accctgcagatggagcctcaggactttgtgaactccagtgagacgcgcctggctgtgtct
cgcatcatcacctggaccacagagcccaaaagctcagatgtcagaaaggctgcccagtcg
gtgttgatctcgttgttccagttgaacactccagagttcaccatgctgctggcagctctg
cccaagaccttccaggatggcgccaccaaactgctacagaaccacctgcggaacacaggc
aatgctgcacaggctccgacaggaagccctctgacacgccacaccccccgctctcctgcc
agctggtccagccccctcacctctcctaccaacacatcacagaacacatcctcacccagt
gcatttgactacgacacagagaacatgaactcagaggacatctacagtagtctgagagga
gttacagaggccatccagaacttctccgtccgtagccaggaagacatgaatgaaccagtc
agacggagggaaggagaggagggtggtagtgctggtgctgaccaggtggatggaggtcgt
acagctctggacaacaagacgtctctcctcaacacccccctgctctcctcttctccccgg
gggtcccgtgaccccttcactgactcccccttcaaacacagcgtcatagatacttcacta
gacgaatcagaccagcaaactgacgacagcagcattgaccagtcggagctggtgtctgag
ctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaaggcagcgctttgt
gagctcttgaagctgattcgagaaaacaccctgcaggtctcctgggatgaacacttcaaa
accatcctcctgttactactggagacgctgggggacagagagcatgtgatcagggcgtta
gctctgcgtgttctgagggagattctgagccgtcagccctggaggtttaagaactacgct
gaactcaccatcatgaaggccctggaggcgcacaaggacccacacaaagaggtggtacga
gcggcagaggagactgcagccatgctggcgtcgtccatcagtccagaccagtgcatcaag
gtgttgtgtcccatcatccagtcagctgactaccccatcaacctggctgccatcaagatg
cagactaaagttatagagagggtcccccatgaaggactagtcagcatgctgcctgagata
gtccccggactcatacagggttatgacaactctgagagcagtgtcaggaaggcctgtgta
ttctgtctggtggccctctacgcagtcataggggaggagctaaaacctcacctcaaccaa
ctgtctggcagcaaattgaagttgttgaatctgtacatcaagcgtgcccagtctggctcc
agtggtggtgagcccccagcagacagcctatag
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