Salmo salar (Atlantic salmon): 106588739
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Entry
106588739 CDS
T04363
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106588739
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
106588739
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
106588739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
IBR_2
Ank_2
Ank
Ank_4
Ank_5
UBA_ARI1
zf-RING_2
zf-RING_UBOX
Rcat_RNF216
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
106588739
NCBI-ProteinID:
XP_014033534
LinkDB
All DBs
Position
ssa27:23834359..23861171
Genome browser
AA seq
1504 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNSQFREGLDPNASYGETYQHNTPLHYTCRHAMTR
LLRSFLFSKEGNPNKRNVQNETCLHALCQGAHILLLPEGALSPRLARPQRDEQRRADCLQ
MILSWTGARLDRGQYERVNINATDNRNSTCLHYAAAAGMKSCVELLVQAGSDLFVEDEEK
LTPCDHAERQQHTHLALRLEAMMVFSQHTPTETQTPSSTLRHKEPYEGLKLQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDSEECCQRSGVLMPTPPPSGCNAW
DTLPSPRTPRSPLTLTLTSLTDSCLTPGEEGGTTCGICLCSISVFEDPIDMSCGHEFCRA
CWEGFLNVKIQEGEAHNIFCPACDCYQLVPVQVIESVVSREMDKRYLQFDIKAFVENNPS
IRWCPAVRCERAVRLTRPGPGVNHLGFPLLPSPAVDCGKGHLFCWECLGEAHEPCDCQTW
RMWLQKVSEMKPEELAGVSESYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCK
YDFCWICLEEWKKHSSSTGGYYRCTRYEVITQLEEQSKEMTGEAEKKHKSFQELDRFMHY
YSRYKNHEHSYKLEQRLLKTAKEKMEQLSRAFIGCEGSPPDTRFIEDGVCELLKTRRVLK
CSYPYGFFLQPHSTQKEIFELMQTDLEMAVEDLAQKVNRPYLRTPCHKIVSAACLVQQKR
EEFLASVARGVAPNDSPEVPRRSFPAGSWDWEYLGFTSPEEYADFQYRRRHRPRRRGDMP
SLHSLRSNSSTPEPNQNTENTEVLQERVEGRRQPLRSLDEDDPNILLAIQLSLQDSRRER
EMERGLGGGLERGSGVIEGPGLGSGQGLDIGPVMGPGVGGLSETQDPSSVGGSLGASGSS
NLPRPDPNQSLNAELLELGESLMRLGQITTPYTLDNTNIPTPYSLDHTYDHYNPSPRYSQ
SQDLSYTSYTTDHNYAVLEPDHTTPYTRGYGHTCDHNQDHTTINIPFTPEHDHNCGQNQN
RGHPTINAFYSSVHCQPSLYTKTSPPQTDLTASSSPKHTSLYPSDPEPYAMLSLPHNPEP
DQTISCTQDTHPDQNHHHCCHSSHYTPNPDPYTPNPDHYTPNPEHYTPNPDPYTPNPDPY
TPNPDPYTPNPDPYTPNPDPYTPNPDPYTPNPDHYTPNPDHYTPNPDPYTHNPDPYTPNP
DPYNPNPDNYNPNPDPYNPNPDPYNPNPDPYNPNLDPYNPNPDYTSNPDPYRTSSYTSDP
HDLDPNHPTSDPHGLDPNHPTSDPHGLLLPSPDPELLLSPVVPPGGPFTPSDPGCLERLD
PSAEALLLDNIMAWIQHTHPQDSPQNIDLIPSASSETGSPLEKYSPPDTETDSPTVSPQD
GGDPKSDSPPDAQASFSGEALAEQRQAQEGEAGRGQAGSPGPVDSLEVKRPSTLDLECCE
GEECVECVVTGFVPDLSQDAMDTHIHSHTHCGDNLTSTKTDSSPTPWVVEDQSRAEWEEQ
VHLV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccactaagttccggaaggctctagtcagcggggacgaggcgttggca
tggcaactgtacgagggcaacagccagttcagagaggggttggaccccaacgcgtcctac
ggagagacctaccaacacaacacaccccttcactacacctgcaggcacgccatgacacgc
ctgctcaggtcgttccttttcagtaaagaagggaaccctaacaagcgtaacgtgcagaat
gagacatgtctgcatgcgttgtgtcagggagcgcacatcctgctgctgccagagggggca
ctgtctcccagactggccagaccacagagagacgaacaacgcagggcagactgcctacag
atgatcctgagctggaccggggctaggctggacagaggacagtatgaaagggttaacatt
aacgctacagacaacaggaacagcacctgtctacactacgctgctgctgctggtatgaag
agctgtgtagagctcctggtccaggctgggtcagacctgtttgtggaggacgaggagaag
ttaaccccgtgtgaccacgcagagagacagcagcacacacacctggccctgcgcctcgaa
gccatgatggtgttctcacaacacacacccaccgagacacaaacacccagcagcacgctg
cgccacaaagagccctatgagggtttgaagctgcaggacttgaggagactgaaggacatg
ttgatagtggagacagcggacatgctacaggctcctctcttcaccgctgaggcactgctc
agagcacacgactgggacagggagaagcttttggaagcctggatgagtgattctgaggag
tgctgccagcggtctggggtcttgatgcccacccccccgcccagcgggtgcaacgcctgg
gacaccctgccttccccccgaacccctcgctcccccctcaccctaaccctcacctccctc
actgacagctgcctcaccccaggggaggagggagggactacgtgtgggatctgcctgtgt
tccatctcagtgtttgaagacccaatagacatgtcctgtggtcatgagttctgccgagcc
tgctgggaagggtttctgaatgtgaagatccaggagggtgaggctcataacatcttctgt
cctgcctgtgactgttaccagctggtgcctgttcaggttatagagagtgttgtctccaga
gagatggacaaacgatacctgcagttcgacatcaaggcgttcgtggagaacaacccatct
atccggtggtgcccggcagtgcggtgtgagagagcggtcagactgaccagacctggtccg
ggggtcaaccacctggggttccccctgctgccctcccctgcagtcgactgtggcaagggt
cacctcttctgctgggagtgtctaggtgaggcccatgagccatgcgactgtcagacatgg
aggatgtggctgcagaaagtctcagagatgaagccagaagagttggcaggtgtatcggag
tcgtatgaggatgcagctaactgtctgtggttgttaaccaactctaaaccctgtgccaac
tgcaagtctcccatacagaagaatgagggctgcaaccacatgcagtgtgccaagtgtaaa
tatgacttctgctggatctgtctggaagagtggaagaaacacagctcttcaactggagga
tactaccgctgtacacgctatgaagttatcacacagctagaggagcagtccaaagagatg
actggagaggcggaaaagaagcacaagagttttcaggagttggaccgcttcatgcactac
tacagccgctataagaaccatgaacacagctataagttagaacagagactattgaaaaca
gccaaagagaagatggaacagctgagtagagccttcattggatgtgaaggctccccccca
gacaccaggtttatagaggacggtgtgtgtgagttgttgaagacgcgtcgtgtgttgaag
tgttcctacccctacggattcttcctccagcctcacagcacacagaaggagatatttgaa
ctcatgcagactgatctggagatggcggtggaggacttggctcagaaggtgaaccgtccc
tacctgcgtacgccgtgtcataagatagtcagcgctgcctgtctggtacagcagaagaga
gaggagttcctggcctcagtggctagaggggtggcccctaacgactcacctgaagtacct
aggaggagtttccctgctggatcatgggactgggagtacctgggattcacctctcctgag
gagtatgcagatttccagtaccggcggagacaccggccgcgtcgtagaggagacatgccg
agtttacacagtctgaggagcaacagcagtactcctgaaccaaaccagaacactgagaat
acagaggtcctccaggagagagttgaggggcggagacagcctctgaggtcactggatgaa
gatgaccccaacattctactggccatccaactgtcactacaggactcacggagggagaga
gaaatggagagagggttgggaggaggactggagagaggctctggtgtgattgagggccca
gggcttgggtctggacagggtctggatatagggccagtaatgggtccaggggtggggggc
ctcagtgagactcaggacccctccagtgtgggtgggtctctgggggccagtggctcctct
aacctccctagaccagaccctaaccagtcgctaaatgctgagctgttagagctaggagaa
agtctgatgagactgggacaaataactactccatataccctagacaacactaatatccct
acgccatatagcttagaccacacctacgaccactacaacccttcccccaggtacagtcag
agtcaggaccttagctacacatcttatacaactgaccacaactatgctgtactggaacct
gaccacaccacaccttatacacgcggctacggtcacacctgtgatcataaccaggaccac
accactatcaacattcccttcactccagaacacgaccataattgtggtcaaaaccaaaat
cgtggccatcccactatcaatgccttctacagttctgttcactgccaacccagcctctac
actaaaacatctcctcctcagacagaccttacagcatcttctagccctaaacacacaagc
ctttacccctcagacccagagccatatgctatgttaagccttccccataaccctgaacca
gaccaaaccatctcttgcacccaggacacacatccggaccagaaccaccaccattgctgc
cactccagtcactacacccctaacccagacccttacacccctaacccagaccattacacc
cctaacccagaacattacacccctaacccagacccttacacccctaacccagacccttac
acccctaacccagacccttacacccctaacccagacccttacacccctaacccagaccct
tacacccctaacccagacccttacacccctaacccagaccattacacccctaacccagat
cattacacccctaacccagacccttacacccataacccagacccttacacccctaaccca
gacccttacaaccctaacccagacaattacaaccctaacccagacccttacaaccctaac
ccggacccttacaaccctaacccggacccttacaaccctaacctggacccttacaaccct
aacccagactacacctcgaatcctgacccataccgcacttcctcctacacctcagacccc
cacgacctagaccctaatcaccctacctcagacccccacggcctagaccccaatcaccct
acctcagacccccacggcctcctactcccctccccagacccagaactcctcctctcccca
gtggtccctccaggaggtcccttcacccccagtgaccctggctgcctggagcgcctggac
ccctcagctgaagccctgctcctggacaacatcatggcctggatccaacacacacacccc
caggacagcccccagaacatcgacctcatcccctcagctagctccgagactggctcaccc
ctggagaaatactcacctccggacacagagacagactcacccactgtttcaccccaagac
ggtggggacccaaagagtgattcccctcctgacgcccaggccagtttcagcggggaggcc
ctagccgagcaacggcaggcccaggagggagaggcgggtaggggacaggctggctccccc
ggccctgtagacagcctggaggttaaaagacccagcactctggatctggagtgttgtgag
ggtgaggagtgtgtggagtgtgtggtcacagggtttgtgccggacctgtcgcaggacgca
atggacacacacatacactcacacacacactgtggagataacctcacttctaccaagaca
gactcaagccccaccccctgggtagtggaggaccaatcacgcgcggagtgggaagagcaa
gttcacctggtgtga
DBGET
integrated database retrieval system
