Salmo salar (Atlantic salmon): 106588763
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Entry
106588763 CDS
T04363
Symbol
pum1
Name
(RefSeq) pumilio RNA binding family member 1
KO
K17943
pumilio RNA-binding family
Organism
sasa
Salmo salar (Atlantic salmon)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
106588763
NCBI-ProteinID:
XP_014033588
UniProt:
A0A1S3Q0U7
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Position
ssa27:complement(23183952..23215866)
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AA seq
1164 aa
AA seq
DB search
MSSVCVLKGKAVLWQDSFSPHLRTSTPSMPVVLSSGGHAPPAGQTPHAPSPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPIGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWESDEAGKDGPKGIFLDQWRDSAWGATDHSVSQPIMVSRRPGGGFHSGGEVGGS
VMSPRSESGGLGVSMVEYVLSSSPAEKLDSCLRKGPYGPRDGEVEDEKREKPKAAFEVEK
LKEMTEGEGDVISDVINPNGLPVQNGLDVDVKEYSRQGQMPPAGTDTDMMGGVGGCVGGE
GMVPMGGGGGPKPQEDFSGVEQGVTMDTMESVMEPLQFDYNSQMAMDSQPTVGLFDYSNQ
QQLFQRPSALALQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAGPPGTDPYAAGL
AAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAQGQNQQNQQQVMRGGG
NQRPLTPSQGQQGQQNDQLISAAAVNSALAFGQGLAAGVPGYPMLAPAAYYDQTGALVVN
TGSRGGPVRLMAPAGSVIISPSAAQAVAAAAAAGGGANGGMGGGANGPFRGMQSQQPQQQ
GGGAMSGNSFYGSSSLSNSSQSSSLFSQGSQTTYCSTQPGPGSASLGFGQSNSSLGATLG
ATLGGFGTAVANSSGGSGSRRDSLTGSSDLYKRTQSSLTPIGHGGFYNGTLGFSSSPGPV
GMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSASSGSSL
FSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSR
FIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGH
VLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQ
PHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYG
NYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAERAVLIDEVC
SLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILA
KLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagggtaaagcagtgctctggcaggactcattcagcccc
cacctcagaacttcaactcccagcatgcccgtggtgctgagcagcggaggacacgccccc
ccggccggacaaaccccacatgccccgtcccctagccaacagggcgtggcgggtgccggt
cggtctcaggatgatgccatggtggattacttcttccagcggcagcacggagagcagcct
ggaaaacaccgctggcccattggtgataacatccacgacagccaggtgcggtcgatggat
gagctgaaccatgacttccaggccctggctctagaggggcgtgccatgggagagcagctt
ctgacaggtaagaagttttgggagagtgatgaagcggggaaagatggaccaaaagggatc
tttctggaccagtggagggacagcgcgtggggggccacagaccactcggtatctcagcca
atcatggtgtcccgtcggcctggcggtgggttccatagtggcggggaagtgggcgggtca
gtgatgtcaccgcggtcagagagtgggggtttaggagtcagtatggtagagtacgtcctc
tcctcctctcccgccgaaaaactggactcctgcctacgcaagggaccctacggtccgagg
gatggagaggtggaggacgagaagagggagaaaccaaaggccgcgtttgaagtagagaaa
ctcaaggagatgacggagggagagggtgatgtcatcagtgatgtcatcaaccctaatggg
ctccctgtgcagaatggcctggatgtggacgtcaaagagtatagtcgtcaaggccagatg
ccgcctgcggggacagacactgacatgatggggggtgtaggggggtgtgtaggaggggag
ggtatggtccccatgggaggaggcgggggtcccaaaccccaagaggacttctctggtgtg
gaacagggcgttaccatggataccatggagtctgtgatggagcctctgcagtttgactac
aactcccagatggccatggactcacagcccaccgtggggctgtttgactacagcaaccaa
caacagttgtttcagagacccagtgcgctagcactgcagcagctgacagcagctcaacag
cagcagtatgccttggcagcagcacagcaatctcacattggtctggctcccgcgtttgtt
cccaacccttacatcatcagtgcgggtccgcctggaactgacccctacgctgctggactg
gcagctgctgcaacactgggcccagcggtgatgcctcctcagtactacggggtaactcca
tggggagtgtatccagccaatctgttccagcaacaggctgcagccgccaacaactcagcc
aatcaacaggctcaaggacagaaccagcagaaccaacaacaggtgatgcgtgggggcggt
aaccagagacccctgacccctagccaaggtcaacagggtcagcagaatgaccagctgatc
tccgccgcagctgtcaactcggcgctcgccttcggacaggggctggcggccggcgtgcct
ggctatcccatgctggctccagctgcctactatgaccagacgggggcgctagtggtcaac
acaggatctaggggcggacctgtacgcctcatggcccctgcaggctcagttattatctct
ccatccgctgcacaagcagtggcggctgcagcagctgcgggtggcggggctaacggcggt
atgggaggcggggccaatggtccgttccgaggcatgcaatcccagcagcctcagcagcag
gggggaggggctatgtcaggaaactccttttatggatcctcctctctcagcaactcctcc
cagagctcctccctcttctctcaaggtagccaaacaacgtactgctccacccagcccggc
cctggctctgcctctctggggttcggtcagagcaactcttcactgggagcaacattggga
gctacgctgggaggctttgggaccgcagtggctaactccagtggtgggagtggttctcgt
cgtgactctctgaccggcagtagtgacctgtacaaacgcacacagtcgagtctcactccc
attggtcacggggggttctacaacggaaccctgggctttagctcctcccccgggcctgtt
ggaatgcccctgcccaaccaaggcccctcccactccctaaccccacccccatctctgtcc
aatcacagctcctcatccaacctcaacctgggaggtctgaccaatggcagcggtcgtttc
atttctgctgctccgggggcggaggcgaagtatcgcagtgccagttctggctcctccctc
ttctctcccagcagccagctcttcccgtcgtcacggctacgctacggaatgtcggatgtg
atgccgtcagggcggagccggctcctggaagacttccggaacaaccgctaccccaacctg
cagctgagagagattgctgggcacatcatggagttcagccaggaccagcatggcagcagg
tttatccagttgaagttggagagggccagctcagcggagcgtcagctggtcttcagtgag
atcctccaggctgcctatcaactcatggtcgacgtcttcggaaactacgtcatccagaag
ttctttgagtttggcagtctggaccaaaagcttgctctagcagagaggatcaggggtcat
gtcctgtctctggccctgcagatgtatggctgtagagtcatacagaaggccctggagttc
atcccctcagaccaacaagttataagtgagatggtgcgagagctggacggccatgtattg
aagtgtgtgaaggatcagaacggcaaccacgtggtgcagaagtgtattgagtgtgttcag
ccccacgcactacacttcataatagacgccttcaagggacaggtgtttgccctctccacc
cacccctacggctgtagagtgatccagcgtattctagaacactgccttccagaccagacc
ctgcccattctggaggagctgcaccaacacactgaacaactggtgcaggaccagtatggt
aactatgtgatccagcatgtattagaacacggcagagcggaggacaagagtaagatagtg
gctgagatcagaggaaacgtactggggctcagccaacacaagtttgctagtaacgtggtg
gagaagtgtgtgagccatgcgtcccgtgcagagcgggccgtgttgatagacgaggtgtgt
agcctgacggaggggccccacagcgccttgtacaccatgatgaaggaccagtacgccaac
tacgtggttcagaagatgattgacgtggctgaaccaacacagaggaagatcgtaatgcac
aagatccggccccacatctccactctgaggaagtatacgtatggcaaacacatcctggct
aagctggagaaatactacatgaagaatggagtggacctgggccctctctgtggccctccc
aatggcatcatgtaa
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