Salmo salar (Atlantic salmon): 106588872
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Entry
106588872 CDS
T04363
Name
(RefSeq) transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106588872
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106588872
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106588872
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106588872
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106588872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Spem1
Motif
Other DBs
NCBI-GeneID:
106588872
NCBI-ProteinID:
XP_014033849
UniProt:
A0A1S3Q369
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Position
ssa27:28379122..28385448
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AA seq
312 aa
AA seq
DB search
MSDIEDGNFDGRDSRSPSKSDRGSPVRVKSESRSGSPSPSRAAKHSESRSRSKSRSHSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKKSQSESPNRRHTSSRSHDFRKETFGQGAGGDE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFER
IDDSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNGGGGGERNGGGGGR
RGRDSYDRYDDRRGGGYDRGYDRGYDRGYDRGDRGYDRYDEYDKYSRRRSPSPYYSRYRS
RSRSRSYSPRRY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattgaggatggaaactttgatggacgagactctcgctccccatccaaatcg
gaccgtggaagtcctgtccgggtcaagtcggagagcagatccggctccccgagcccatcc
agggccgccaaacactcagagtctcggtcccgctctaagtccaggtctcactcgcggagg
cactccaaccgcaggtacagccgctctcgctccccctccaaccggaagaagtcccgttcc
tacagcccggaataccggaagaagaagagccagagcgagtcacctaaccgccgccatacc
agcagcagaagccatgacttcagaaaggagacattcggtcagggagcaggaggtgatgag
gatgctagggcgaaccctgaccccaaccagtgcctgggggtgtttgggctgagcctgtac
accacggagaaggacctgagggaagtgtttggccggtatggcccgctggccggggttaac
gtggtgtatgaccagcgcaccgggcgctcccgcggctttgccttcgtctacttcgagagg
atcgacgactccaaggaggcgatggagcgtgccaacggtatggagctggacgggagacgt
atcagagtggacttttccatcaccaagagggcccacacccctacgcctggcatctacatg
ggccgacccacacataatggtggtggtggaggagagcgaaatggtggcggtggagggagg
aggggtcgggactcgtatgaccgatacgacgatcgacggggcggcggctacgaccgtgga
tatgaccgtggatacgatcggggatacgatcggggagaccggggatatgacagatatgac
gagtacgacaagtacagtcgcaggcgttctccctctccctactacagtcgatacaggtca
cgctccaggtctcgctcatacagcccacgacgatactaa
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