Salmo salar (Atlantic salmon): 106588905
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Entry
106588905 CDS
T04363
Symbol
VPS28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106588905 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106588905 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106588905 (VPS28)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
106588905 (VPS28)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106588905 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
106588905 (VPS28)
Exosomal proteins of colorectal cancer cells
106588905 (VPS28)
Exosomal proteins of bladder cancer cells
106588905 (VPS28)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
106588905
NCBI-ProteinID:
XP_014033926
UniProt:
B9EPU7
LinkDB
All DBs
Position
ssa27:complement(29452472..29464177)
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AA seq
223 aa
AA seq
DB search
MFHGIPVAGGMGGAPVNKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VTLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggaatacctgtcgcaggaggtatgggaggagctcctgtcaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgccagagagagagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacccttcaggccctggagaaagcttacatcaaagac
tgtgtgactcctaatgagtacacggctgcttgctccaggctactggtgcagtacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgatgacttctgcaggaagtac
agacttgactgcccgctagctatggaaagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgctgatatcgtatcgctctttatcacggtg
atggacaagctacgtctggaaatccgggcgatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcaccctctggttgaccactctcagcagcatgtcagcctctgatgagctggatgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaacgccttcaaccgcttctta
cactcctcctaa
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