KEGG   Salmo salar (Atlantic salmon): 106588923
Entry
106588923         CDS       T04363                                 
Symbol
sem1, DSS1, shfm1
Name
(RefSeq) SEM1, 26S proteasome complex subunit
  KO
K10881  26 proteasome complex subunit DSS1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03050  Proteasome
sasa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    106588923 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    106588923 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106588923 (sem1)
   04131 Membrane trafficking [BR:sasa04131]
    106588923 (sem1)
   03051 Proteasome [BR:sasa03051]
    106588923 (sem1)
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106588923 (sem1)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     106588923 (sem1)
Membrane trafficking [BR:sasa04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    106588923 (sem1)
Proteasome [BR:sasa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     106588923 (sem1)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     106588923 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 106588923
NCBI-ProteinID: XP_014033946
UniProt: B5X722
LinkDB
Position
ssa27:29736787..29747590
AA seq 71 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETSQ
NT seq 216 nt   +upstreamnt  +downstreamnt
atgtctgacaagaaacagactgtagatttgggattattagaggaggacgatgagtttgaa
gaattcccagccgaggattggactgggttggatgaggatgaagatgcccacgtgtgggaa
gacaactgggatgatgacaatgtagaggacgacttctctaatcaactaagagcggagctg
gagaaacatgggtacaagatggagacgtctcagtag

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