Salmo salar (Atlantic salmon): 106588927
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Entry
106588927 CDS
T04363
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106588927
09142 Cell motility
04814 Motor proteins
106588927
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106588927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106588927
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106588927
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
106588927
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
106588927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40
Beta-prop_EML
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106588927
NCBI-ProteinID:
XP_014033958
UniProt:
A0A1S3Q1W3
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All DBs
Position
ssa27:complement(29869842..29961717)
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AA seq
520 aa
AA seq
DB search
MADKSDLKAQLERKKQRLAQIREEKKRKEEERKKETETHQKAEAAPVDSDLDRKRRETEA
LLQSIGISQEPSLVPIPMSPSKSVSRHSTPSETRSQDSADGAAASRTLQWDSDPSVLQLQ
ADSELGRRMHRLGASKITQVDFLPREVVSYCKETQTTIIHLSEEEEEEDEEITELKPGPD
SDQHEEEDSKETEEGYPCTELTEEEKQQILKSEEFLSFFDCSIRVMERALAQESDIFFDY
SGQDLDDKEGDLQGGSSLSLSRLFYDDHWSKHRVITCLDWSPQYPELLVASYNNNEDAPH
EPDGVALVWNMKFNKNTPEYVFHCQSSVVSVGFARFHPNLVVGGTYSGQIVLWDNRSHRR
TPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYN
KSKAVAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAGICEMFEGHHGPVTGLSCHNA
VGPVDFSHLFVTSSFDWTVKLWSTKVRRALYTGLSNCGTL
NT seq
1562 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaagtgacctaaaagcccagctagagcgcaaaaagcagcggctagctcag
atcagggaggagaagaagaggaaggaggaggagaggaagaaggagacagagacgcatcag
aaggctgaagctgccccagtggactctgacttggaccggaagcgcagagagacagaggcg
ctcctacagagcatcggcatctcccaagaaccatcactagtcccgatccccatgtcccca
tccaaatcagtaagccgacacagcacccccagtgagacgagaagccaggactcagccgat
ggggccgcagccagcaggaccctgcagtgggactctgacccctctgttctgcagctgcag
gcagactccgagctagggcgcaggatgcatagactgggggcgtctaagatcacacaggta
gacttcctacccagagaggtggtgtcgtactgcaaagagactcagacgaccatcatccat
ctgtctgaggaggaggaagaggaggatgaagagatcacagagctgaagcctggtccagat
tctgaccagcatgaggaggaggacagcaaggagacagaagagggctacccctgcacggag
ctgacagaggaagagaagcagcagatcctgaaatcagaggagttcctcagtttctttgac
tgcagcatcagggtgatggagagagccctggcccaggaatcagacatcttcttcgactac
agcggacaagacctggatgacaaggagggggacttacaaggtgggtccagtctgtccctc
agtaggttgttctatgacgatcactggtccaaacatcgagtcatcacctgtctggactgg
tcccctcagtacccagagctgttggtggcatcctacaacaacaatgaggatgctcctcat
gagcctgacggtgtagctctggtctggaacatgaagtttaacaagaacacacctgagtat
gtcttccactgccagtcttcagtggtgtcggtgggctttgcccggttccatcctaacctg
gtggtgggcggaacttactctggccagatagtcctgtgggacaaccgcagccaccgcagg
actcctgtacagagaacccccctctcagctgcagctcacacgcacccggtatactgtgta
aacgtggtgggaacccagaatgccaacaacctgatcaccgtgtccacagacggcaggatg
tgctcctggagtcttgacatgctctctcagccacaggagagcatggagctggtgtacaac
aagtctaaagcggtggctgtgacaggcatggcgttccccactggagacgtcaataattat
gtggtggggagtgaggagggaaccgtgtacaccgcatccagacacggcagcaaggcgggg
atctgtgaaatgttcgagggccaccatgggcctgtgacgggcctcagctgtcacaacgcc
gttggccctgtagacttctcccacctcttcgtcacctcgtcgttcgactggactgtcaaa
ctgtggagcactaaggtaagaagagctctttatactggactgtcaaactgtggaacacta
ag
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