Salmo salar (Atlantic salmon): 106589011
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Entry
106589011 CDS
T04363
Symbol
kdm1b
Name
(RefSeq) lysine demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106589011 (kdm1b)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
106589011 (kdm1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
zf-CW
NAD_binding_8
SWIRM
DAO
Thi4
Pyr_redox_2
HI0933_like
Pyr_redox_3
FAD_binding_3
FAD_oxidored
Pyr_redox
Lycopene_cycl
FAD_binding_2
NAD_binding_9
GIDA
2-Hacid_dh_C
AlaDh_PNT_C
KARI_N
FMO-like
TrkA_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106589011
NCBI-ProteinID:
XP_014034109
UniProt:
A0A1S3Q3X0
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Position
ssa27:complement(35164249..35181337)
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AA seq
837 aa
AA seq
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MLTDADYTVNASGARRAKKRTAMESSSGDGQSSLRSSGRQVNVRMKRCNNPPPGQTKRKA
TDTEEEEDQSEKKYRKCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECF
DHYYRSHKDGYETYASWKRVWTGNGKSEPSLKAFMADQQLPYWVQCTKPDCGKWRQLTKE
IQLTASLAATYRCGMKFNNVKTEGPDQCSLPEDLRVAEVIDSWWHSMLILPPLFKDSPAN
PFLTAYYPDCVGMSPSGSTSNHSHAELRAEHCRAVPPQIPGLCPYFQPFYQPNECGKALC
VRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRGCKEVLTPQNCAPHIIVRGLVRV
RCVQEMDRVLLFMTRKGLINTGVLSVKQPLLPERYHNKNVIVIGAGASGLAAARQLQNFG
MQVVMLEASERIGGRVWDDTSLGGVTVGRGAQIVNGCVNNPIALMSEQLSINMHKLGERC
DLFQEGGSTTDPAIDKRMDFHFNAILDVVSEWRKDKSQNQDTPLGEKIQEVYKTFLQESG
VQFSQLEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHTLLTEGYSSVLNR
LAEGLDIRIKSPVQAIDYSGDIVKVTSSNGTQWTAQKVLVTVPLTLLQKNIIKFNPPLPE
RKLKAIHSLGAGLIEKVALQFPFRFWDGKIQGADYFGHIPPSPDKRGMFGVFYDMDPQGK
RSVLMSVITGEALPSIRDMEDKDVADQCMKVLRELFKEQEVPEPVNYFVTRWSRDMWSQM
SYSFVKTGGSGEAYDVIAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagatgcagattatacagtgaatgcttcaggtgctcggcgtgccaagaagagg
acagcaatggagtcatcatctggggatggtcagtcgtcccttcgctcctctggtagacag
gtcaacgtcagaatgaagcgctgtaataatcctccacctggacagactaaaagaaaagcc
actgacacagaggaagaagaggaccaatctgagaagaagtacagaaagtgtgaaaaggct
ggatgctcggccacatacccagtgtgctttgctagcgcctctgaaaggtgcgccaaaaac
ggctacacttctcggtggtaccatttgtcctgcggggagcacttttgcaatgagtgtttt
gatcactactatagaagtcacaaagatggctatgagacatatgcatcctggaagagggtt
tggactggcaatgggaagagtgagcccagtctgaaagctttcatggcagatcaacagctt
ccatactgggtccaatgcactaagccagactgtgggaaatggcgtcagctcaccaaggag
atccagctcactgcctcactagcagccacgtatcgctgtggcatgaagttcaacaatgtc
aagaccgaagggccagaccagtgctctctgccagaagatttgagagtggcagaggtgatc
gacagctggtggcattccatgctgatcctgcccccgttatttaaggacagcccggccaac
ccgttcctcacagcctactatcccgactgtgtgggcatgagcccctcaggatccaccagc
aaccactctcatgctgagttgagggcagagcactgcagagccgtcccaccacagattcca
gggctgtgtccatacttccagcccttttaccagcccaacgagtgtgggaaggccttgtgt
gtgcgaccggacatgatggagctggatgagctctacgagtttccagagttttcccgtgac
cccaccatgtacctggccctgcgcaaccttatcctggcctcctggcacagaggctgtaag
gaggtgctgacaccccagaactgtgctccccacatcattgtgagagggctggtgcgtgtg
cgttgtgtacaagaaatggacagggtgcttctcttcatgaccaggaagggtctgatcaac
actggggttttatcagtcaaacagcccctgcttcccgagcgctaccacaacaagaacgtg
attgtgattggagccggggcatcggggctggctgctgcgcggcaactgcaaaactttggc
atgcaggtggtgatgctcgaggcgagtgagcggattggagggcgggtgtgggatgataca
tcgctgggcggcgtcacggtgggtcggggggcccagattgtgaacggctgtgtgaacaac
ccaattgcactgatgagtgagcagctcagcattaatatgcacaagctgggggagaggtgt
gacctgttccaggagggagggagtaccacagacccggccatcgataagcgcatggacttc
cactttaacgccatcctggatgtggtgtcagaatggaggaaagacaagtctcagaaccag
gacactcctctgggagaaaaaatccaggaggtctacaagacattccttcaggagtctggg
gtccagttcagccagttggaggagaaagtgcttcagttccatctcagcaacctggaatat
gcctgtggaagcacactggaccaggtatcagctcggtcctgggaccacaacgagttcttt
gctcagttctcaggagaccatacactgctgacagagggctattcgtctgtgcttaacaga
ctggctgagggtctcgatatccgcatcaagagcccggttcaagctatcgattactcaggg
gatatagtcaaagttacctcatccaatgggactcagtggacagcacagaaagttctggtg
acagtcccattgactttactccagaagaatatcattaaattcaaccctcctcttcctgag
agaaagctgaaagccatccacagtcttggagcaggtctcattgaaaaggttgctctgcag
ttcccgtttcgcttctgggacggaaagatccaaggagcagattactttggccacattcca
cccagtcctgacaagagagggatgtttggtgtattctatgacatggatccacagggaaag
cggagtgtcctgatgtccgtcatcactggtgaagctctgccctctatcagggacatggag
gacaaagatgtcgctgatcagtgcatgaaggtgctgcgtgaactcttcaaggagcaggag
gtcccagagccggtgaattactttgtgactcggtggagcagagacatgtggtctcagatg
tcatacagctttgtgaagacaggaggcagtggggaagcctatgacgtcattgctgaagat
gtacaaggaaaagtgttctttgctggggaggcgaccaacaggcactttcctcagacggta
acaggagcctatttgagtggcgtccgagaagcgagtaaaatagctgctttgtaa
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