KEGG   Salmo salar (Atlantic salmon): 106589352
Entry
106589352         CDS       T04363                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106589352
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106589352
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106589352
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106589352
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_ECM29 Sec7-like_HUS Adaptin_N
Other DBs
NCBI-GeneID: 106589352
NCBI-ProteinID: XP_014034673
UniProt: A0A1S3Q3X1
LinkDB
Position
ssa28:4862482..4877747
AA seq 1024 aa
MMAADSALLLGLVEEFVLGQQDRKAVDTATELKAGQFTILQLVEALGLHLTSSQPQTRAR
GVQLLSNVLQECHGDLTEREVEVLIVFYENRLKDHYVITPHVIQGLKALTKCSVLPPGSA
VSILKSLFQDIHVQSLMLAERSCVYNILIQLMESRESELKGLGADFVFGFVQSVDGERDP
RNLLLAFHIAGKIVREGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITQEELVLALRA
VLTGTPRFAEFLLPLIIEKLDSGVQSAKVDSLQTLTACASLYEHKELAQFLPGLWASLRR
EVFQTASERVESAGLAAVGTLTACLSRSVLNSDSEDSLNVFLELVLKDCQHHLCEPDLKL
VWPSAKLLQATSTASYRASHRVAAAVLPSLIEQYNSRTQCAQRRTLLEVLQGFVHPVKSS
EEDESVLLDFRQSLCSVVFSALSESNADLQITSMRVLTALGQQTGLLLESDVELAVDHLT
RLILEEEDPKVSLAVVECAGALARLHPAAFISKMVPRLKEEIFSEPMAQGDSAAQSQEHS
QQAVRQRCVAALAAVSSRPSLVQESTPVLLQVLTSAHTGTGAFSLEEVISVCHSLQKIAE
QAQDTEETGGVFHDVIPRLLGLALQAALQGSSDHRSPILEETVLSAMVPIISTTCARLQS
QLAGQTASRAVSLFLDGDVSFLPENAFPSQIQLLKAGDSRSQSQMVCLLMGCVCWLPRTV
EVPQMDRLLLELEELSCTSDHPLSYTSAAKCYAGLVNKSPAGEALDSLIDRMLKRISTEL
DSASSPVRTQAFTLLLWVSKALLLRYHPLSTALTDKLFSLLSDPELGSLAANGFSLLMSD
SQDVLNRGSHADVRIMYRQRFFTENSAKLVEGFNAAVQEKKSGYLKALSHIVNNLPRQVQ
LTELPALLPLLLEALSCPDQGVQVSTLSCLQPVLLDPPSTLITQLEVLVGRTLALTTSPT
MKVRIASLRCIHALSRFPEHEIMPFRARVLRALAAPLDDHKRVVRSEAAVARNEWFLLGS
PGGR
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgatggctgcggatagtgccttgctattgggcttggtagaagaattcgttttgggacaa
caggaccgcaaggctgtagacaccgcaacagaactcaaggctggacagtttactatactg
cagttggttgaagccttgggtttgcatctgaccagctcccaaccccagacccgagcccgt
ggtgtccagctcctctccaatgtcctacaggagtgccatggagaccttacagagagagaa
gtggaagtccttatagtgttttatgagaacagattgaaggaccactatgtcatcacacca
catgtcatacaggggctgaaagcgctgaccaaatgctcagtgttgccgcctgggtctgca
gtgtccattctgaaatcactattccaggacatccatgtgcagtccctgatgctggcggag
cggtcgtgtgtttacaacatcctcatccagcttatggaatccagagagtcagagcttaag
ggcctgggtgcagactttgtctttgggtttgtccagtcagtggatggggagagggaccca
cgcaaccttctcctggccttccatatcgctgggaagattgtccgtgaaggctatgatctt
ggtaaattcacagaggagttgtttgaagtgacatcctgctatttccctatagacttcagc
cctcccccgaacgacccccatggcatcacccaggaggagctggtcctggccctgagggcc
gtgctcaccggaacaccacgctttgcagagttcctgctgccactgatcattgagaagctg
gactccggtgttcagagtgccaaggtggactccctgcagaccctgactgcctgtgcttct
ttgtatgaacataaagagctagcccaattcctaccaggcctttgggcctcgctgcgcaga
gaggtgtttcagacagctagtgagcgggtggagtccgctggcctagccgccgtcggtacc
ctgacagcctgtctctcccgctccgtcctcaactccgactctgaagactccctcaatgtc
tttctggagctggtcctcaaagactgtcagcaccacttgtgtgagccggacctgaagctg
gtgtggcccagtgcgaagctgctgcaggccacctctaccgcctcctacagggcgagccac
agagttgccgccgccgtcctgccgtccctcatagagcaatacaacagccgcacacagtgt
gctcagcggcgcaccctactggaggtgttacagggcttcgtccatccggtgaaatcatca
gaagaggatgagagtgtgctgttggacttcaggcagtctctgtgcagtgtagtgttctct
gctctgtctgagagcaatgctgacctccagatcacatctatgcgtgtgctcactgctctg
ggccaacagacaggcctgctgttagagtcagatgtggagctggccgttgaccacctcacc
aggctcatcctggaggaggaagatcctaaagtcagcctggctgtggttgagtgtgcaggg
gctctggctcgcctgcaccctgcagccttcatctctaagatggttccacggctgaaggag
gaaatcttctcagagcccatggcacaaggtgacagcgccgcgcagtcccaggaacattcc
cagcaggcagtgcgtcagcgctgtgtggcggcgctggctgcggtgtcgtcccggcccagt
ttggttcaggagagcacacctgtcctgctacaggtcctcacctctgcacacactggcact
ggcgcgttctcactggaagaggtgatctctgtctgccacagtctgcagaagatagcagag
caggcccaggacactgaagagaccggtggcgtcttccatgacgtcattcctcgcctgctc
gggctggcattgcaggcagctttgcagggttcctcagaccatcgtagcccgatactcgag
gagactgtcctatcagccatggtacccatcatcagcaccacttgtgcccgactacagtcc
caactggctggccaaacagcctcgcgggccgtgtccctcttccttgacggtgatgtttcc
ttcctgccagagaacgccttcccctcccagatccagctcctcaaggcaggtgactcccgg
agccagtcccagatggtgtgcctgctcatgggttgtgtgtgctggctgccacggactgtg
gaggtgccccagatggacaggctactgttggagctggaggagctgagctgtacctctgac
catcccctctcctacacgtcagccgccaagtgctacgctgggctggtcaacaagagtccc
gcaggtgaagccctggactctctgatagacaggatgttaaagaggatctccactgagctg
gactctgcatcctccccagtcagaacgcaggcgttcactctgctgctttgggtgtccaaa
gctctccttctccgctaccaccctctgtccacagccctgactgacaagctcttctccctg
ctcagtgacccagagctgggttcgttagcggccaatggattctctctcctgatgagcgac
tcgcaggacgtcctgaaccgcggtagccacgccgacgtgcgcatcatgtaccgccagcgc
ttcttcacggagaactctgccaaactggtcgagggcttcaacgctgcagtccaagagaag
aagtctggctacctgaaggcactgtctcacattgtaaacaacctacccagacaggtccag
cttactgagctaccagcgctcttgcccctcctgctggaggccctgtcgtgtccggaccag
ggggtgcaggtttctaccctgtcctgcttgcaacctgtcctcctggaccccccttcaacc
ctcatcacccagctggaggtgctggtgggccgcacactggcgctcaccaccagccctacc
atgaaagtgcggatagcctcactgcgctgtatccatgccctctcccgctttccagaacat
gagatcatgcccttccgtgcgagggtgctgcgtgccctggctgcccccctggacgaccat
aagagggtggtgaggagcgaggcagcggtggcccggaatgaatggttccttctggggagt
ccaggaggcaggtga

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