Salmo salar (Atlantic salmon): 106589353
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Entry
106589353 CDS
T04363
Symbol
cssa28h16orf62
Name
(RefSeq) chromosome ssa28 open reading frame, human C16orf62
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106589353 (cssa28h16orf62)
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
Retriever complex
106589353 (cssa28h16orf62)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
106589353
NCBI-ProteinID:
XP_014034675
UniProt:
A0A1S3Q3Z4
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All DBs
Position
ssa28:4892010..4904885
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AA seq
972 aa
AA seq
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MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPLTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSDKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPDPCPDSFTADEVNDTAKETCLNWFFKIASIRELI
PRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLK
DSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALL
TEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRS
LACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIK
HMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVEVCRSIMD
VFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFE
QQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFIT
IPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGF
LLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVQVYISALPLLAAM
SQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGSLA
FSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHFS
DMLQRLTLQSRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggtcgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcttcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacagaccccttgtcc
atgtttgctgcagcctctgccagcgagtcccccctaaccctctcacagagcagctccact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagataaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctctgaccagaaggtcaaggccctcaaaatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagatccctgtccagactcctttacagctgatgaagtgaatgac
acggccaaggagacctgcctcaactggttcttcaaaattgcctccatcagagaactcatc
cctcgactatatgtagaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtggg
atccaggagacggtgcctcgcctcacagctatgatccgggggataggggaccccctggtg
gccgtgtatgcccgggcctacctctgtaggattgggatggaggtggctcctcacctgaag
gacagcctgaacaagaacttctttgacctgctggggacgttccgtcagatccacggcgac
agtgtccagaaccagctggtcctgcagagggtggagatccccgtctacctgaccctctac
tcccccgccatccactggatcctgcagtgtgtctcctacagagcaccagaggccctgcta
acagagatgatggagaggtgcaaaaagcttgggaataatgccctgctgctgaactcggtg
atgtgggcgttcagggcggagtttatcgcgacgagagccaccgacttcatcggcatgatc
aaggactgcgatgaggcaggattccctaagcacctgttgtttggctctctgggccgcagt
ctggcctgtgctgaccctcctgaggcagaaaggctgcccatcctcaatgaggcctggaag
gtcatcaccaaagtgcgaagtccacaggattacatcaactgtgctgagatctgggtggag
ttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaag
cacatgaccccagaccgggcctttgaggatgcctaccctcagcttcagtccgtgatacgg
aagatcctcacctactttcatgacttctctgtcctcttctccatggagcgtttccttccc
ttcatggacatgttccagaaggacagcgtcagggtggaggtgtgtcgctccatcatggac
gtgttcatcaaacaccagcaggagcccactagagatcctgtcatcctcaatgctctactc
cacgtctgcaagaccatgcacgactctgtcaatgctctgacgctggaggatgagaagaga
tctctggccttattgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgag
cagcagctgagtttctgtgtggaggcccgggccaccttctgtaacctggagccagtgctg
gtgcagctcatccacactgtgaaccagctggccatggagacaaggcgtgtgatgaggggg
agccactcccgcaagactgctgcttttgtcagggcatgtgctgcctacagcttcatcacc
attccctccctcaccagcatcttcagccgcctcaacctctacctgctgtctgggcaggtg
gccctggccaaccagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtg
ttgccagaggtgccacgcagtatcagcatcgagggcaaactgcgctcttctgagggcttc
ctgcttgacttcatcaacaacttcctgtcagcactactagttgtgccggaccacccagag
gcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggag
gacaacagtgacgccaaggtccaagtctacatcagcgccctgccactactggctgccatg
agtcaggagagctacctctattccatccccaaagtggactcgaatgaaacactttatgga
ggagatcccaagtttttggcagagatcaacaagttatgtgaaactctgattggacaagtg
ctggaccacctcaagaccttgggtagagatgagagtgttcatagacagggtagtctggcc
ttctctctgttcggctgcctcctggctcatggggacctacgcaacaacaaactcaaccag
ctggctgtcaacctgtggaatctgagccacaagcagggctactgcaacacacgcacctct
gtgcggacactagagttcatcaagcaccaggcccagcagccagacatggctcacttctca
gacatgcttcaacgcctcaccttgcagtccaggacctga
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