Salmo salar (Atlantic salmon): 106589547
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Entry
106589547 CDS
T04363
Symbol
gspt1
Name
(RefSeq) G1 to S phase transition 1
KO
K03267
peptide chain release factor subunit 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106589547 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106589547 (gspt1)
03012 Translation factors [BR:
sasa03012
]
106589547 (gspt1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106589547 (gspt1)
Translation factors [BR:
sasa03012
]
Eukaryotic type
Release factors
106589547 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
DUF5096
Motif
Other DBs
NCBI-GeneID:
106589547
NCBI-ProteinID:
XP_014035139
UniProt:
A0A1S3Q6W1
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Position
ssa28:14201582..14213250
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AA seq
586 aa
AA seq
DB search
MDPRDTAPDSWEQEEDVKARAAAGLQSALAALNVNAKPFIPNVDAAVFVPTFLQSSPTEI
SNSDGHGAEPVASMEVLETVAPVENGGGTETDMAVEVETWEQKEEPGEGEPGGGGALGGE
GGSSEEAQGREEVEMMEEEEEEELPVLKVIPLPPNAPKKEHVNVVFIGHVDAGKSTIGGQ
IMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKH
FTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVK
HLIILVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKDPI
EECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGSIAKAQQLV
MMPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTF
DAQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVC
IARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagcaccggattcgtgggagcaggaggaggatgtcaaggcccga
gctgccgcggggctccagtccgctctcgccgctctcaacgtcaatgccaagccatttatc
ccgaatgtcgacgcggcggtgtttgtgccgactttccttcaaagtagccctacggaaatc
tcaaattccgacggtcacggtgctgagccagttgccagcatggaggttttagaaacagtt
gctccggtggagaacggaggagggacagaaacagacatggcggtggaggtggagacgtgg
gagcagaaagaggagcccggggaaggagaaccaggaggagggggagccctgggaggagag
ggaggttccagtgaagaggcacagggaagggaggaagtggagatgatggaggaggaagaa
gaggaggagttgcccgtgctaaaagtaatcccgctcccaccaaatgccccgaagaaggag
catgtcaatgtggtgttcatcggtcatgtggatgctggtaaatcaactattggaggacag
atcatgtatttgacaggtatggtggagaaaagaaccctggagaaatatgaaagagaagcc
aaagaaaaaaacagagaaacatggtacctgtcctgggccctggacactaaccaggaggag
agagacaagggaaagacggtggaggtggggagagcctactttgagacagagaaaaaacac
tttactatcctggatgcccctggccacaaaagctttgtccccaacatgattggtggggca
tcacaggctgacttggcagtgctggtgatctcggccagaaaaggagagtttgagacaggc
tttgagaagggaggccagacgcgggagcacgccatgctggccaagacggctggagtcaaa
cacctcatcatcctcgtcaacaagatggacgaccccaccgtcaactggagcttggaaagg
tatgaggaatgtaaagagaaattagtgccatttctgaagaaggtgggcttcaacccaaag
aaggacatctacttcatgccttgctctgggctaacgggagccaacttgaaggaccccata
gaggagtgcacgtggtacacggggttgccattcatcccacacctagacagcctgccaagc
ttcaacagaatcacagacggccccgtcagattacccattgtagacaaatacaaggatatg
ggcacggtgatcctggggaagctggagtctggctccattgccaaagcccagcagctggtc
atgatgcctaacaggcacacagtggaggtgctgagcctgctgtctgatgaggtggagaca
gatgaagctgttcctggagagaacctgaagctaaggctgaagggcatcgaggaagaggag
attctgcctggcttcatcctctgtaacgctgagaacctctgccactccggacgcaccttt
gatgcccagatcgtcatcattgagcataaatccataatctgcccaggttacaacgcagtc
ctacacatccacacctgtattgaagaagtacaaatcacagccttaatctgtctagtggac
aagaagacaggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgc
atcgcccggcttcggtgtgccggaaccatctgcctcgagaccttcaaagacttcccacag
atggggaggttcaccctacgagatgaaggcaaaaccattgctattggcaaagtgctgaag
ctggtaccagagaaggactaa
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