Salmo salar (Atlantic salmon): 106589551
Help
Entry
106589551 CDS
T04363
Symbol
ercc4
Name
(RefSeq) ERCC excision repair 4, endonuclease catalytic subunit
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106589551 (ercc4)
03460 Fanconi anemia pathway
106589551 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
106589551 (ercc4)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106589551 (ercc4)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
106589551 (ercc4)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
106589551 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
AmiA-like
Motif
Other DBs
NCBI-GeneID:
106589551
NCBI-ProteinID:
XP_014035145
UniProt:
A0A1S3Q595
LinkDB
All DBs
Position
ssa28:14602515..14609103
Genome browser
AA seq
894 aa
AA seq
DB search
MAGQLLEFETEMFLSLFGSDGLLVTAEGMGIDRILLQFMRVYSEEGSLVLLLNTTTPEQE
FFTEQLRAEGVSHLPQTVTSDVQSTERYEVYTQGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
FLWPRFQASVNSVLDRHKPEVVELHVSLTPAMRAIQSSVLDIMNACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
ESLRSSQKHFGSNSGWLFLDSSTSMFINARSRVYCIPESKKKLKVGADTEKQQSTSEVKR
VLVLEQNPKWEALTEVLQEIEKENKSSELKPGHILICASDDRTCAQLHEYISRGSDSLLN
RLYARTIGKRDALFDPDAHKQQGQGWSRKQQPEKETKGKKAKGKVATKPNSKSKKRPSLT
LTQMVGNREGDEGEVMGSSGDEGGLLEKEEELKLDLSSDAYYGVLKEPLTVIHPLRGCTD
PYSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQRYLTG
LAKEKQAFEHLIREKATMVVPEEREGREDTNLDLSRSQEPAYSTTNTRKAGGQEQPKEPS
RVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTADTCVERKSVSDLIGSLQSGRLY
TQCLSMTRYYRKPVLLIEFDSAKPFSLVARTDFRQEISANDVTSKLTLLTLHFPRLRILW
CPSPHATAELFQELKKGRPEPDAAAAQAITAESDTVAESADLFNPGPYDFLLRMPGVNAK
NYRALVKHADSLAHLAKMSQERLAQILGHAGNGKSLYEFLHNTVDIPAPAQKSK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcaactacttgagtttgagacggagatgttcctgagtttgtttggctcggac
gggctgctggtgactgcggagggcatggggatagaccgcatcctgctgcagttcatgcgg
gtgtactccgaggaggggagtctggtgctgctgctgaacactaccacgcccgagcaggag
ttcttcacagagcagctgcgagctgagggagtgagccacctgccccagacagtgaccagt
gatgtccagagtacagagcgctacgaagtttatacacagggaggggtcctgttcgtcacc
agccgtatcctagtggtggacttcctcactgacaggatacctgcacacctcatctcgggt
atactggtgtaccgggctcataagataattgagtcttgccaggaggccttcatcttgaga
ctgttcagacagaagaataagacaggcttcatcaaggccttcacagacaaggccacctcc
ttctcctcaggcttctgtcaggtggagagagtcatgaggaacctctttgtcaagaaactt
ttcctctggcccagattccaggcgtcagtgaactcagttttggacagacacaagccagag
gtggtggagctgcatgtgtctctgaccccggccatgagggccatccagagctctgtcctg
gacatcatgaacgcctgtctgaaggagctgaagcgctacaaccccacgctggaggcagag
gacctctccctggagaatacccttgggaatgccttcgaaaagaccatccgtcactacctg
gaccctctgtggcaccagctgggagccaagaccaagtctctggtccaggacctgaagatc
ttacgtactctgctgctctacctcacccagtatgactgtgtcaccttcctcaacctcctc
gagtcactccgctccagccagaaacactttggaagcaactctggctggttgttcctggac
tccagcacctccatgtttattaacgccaggagtcgggtgtactgcattcctgagtccaag
aagaaactcaaggtgggagctgacacagaaaaacaacaaagcacttcagaggtgaagagg
gtgctggtgctggagcagaacccaaagtgggaggctctgacagaggtgctgcaggagata
gagaaggagaacaagagctctgaactcaaaccaggccacatcttgatctgtgccagtgat
gacagaacctgtgctcagcttcatgagtacatcagtcgtggctcagactccctactcaat
agactctacgctcgcaccattggcaaaagagatgccctgttcgacccagacgcacacaaa
caacagggccagggttggtccaggaaacaacagcctgagaaagagaccaaaggcaaaaaa
gccaaagggaaggtggcaaccaagccaaactcaaagagtaaaaagaggccgtctctgacc
ctgactcaaatggttggcaacagagagggggatgagggagaagtgatgggcagcagtggg
gatgagggaggcctgttggaaaaggaggaggagctaaagttagacttgtcgtctgacgcc
tactacggtgttctgaaagagccattgacggttatccaccctctgaggggttgcactgac
ccctacagtctgacgcgggtactgcacgaggtggagcccagtttcgtggtgctttatgac
gccgagctcagctttgttcgtcagctggagatttacaaagcctccagaccggggaaacca
ctgagggtgtacttcctgatctatggtggctccacagaggagcaaaggtacctgactggt
ctggctaaagagaaacaagcctttgaacacctcatcagggagaaggccactatggtggtt
cctgaggagagagagggaagagaagacaccaacctcgatctgagcaggagtcaggagcct
gcttactctaccaccaacacacgcaaagcagggggccaggagcagcccaaggagccgtcc
cgtgtgattgtggacatgcgtgagttccgcagtgagctcccgtccctcctccaccggcgc
ggcctggacatcgagcctgtcaccctggaggtgggcgattacatcctcactgccgacacc
tgtgtggagcgcaagagcgtcagtgacctgattggctcgcttcagagcggacgcctctac
acccagtgcctgtccatgacgcggtactaccggaagcccgtcctgctgatcgagttcgac
tcggccaagcccttttccctggtggcccgcaccgacttccgccaggagatctcagctaac
gacgtcacctccaagctgaccctcctcaccctgcacttcccccgcctcaggatcctttgg
tgcccctccccacacgccaccgcagaacttttccaggagctgaagaaaggtcgacccgag
ccggatgccgccgccgcccaggccattacggccgagtcggacacagtggcagagtcagct
gacctcttcaaccctgggccatacgacttccttcttcggatgccaggggttaatgcgaag
aactacagggctctggttaaacacgcagatagcctggcacacctagccaaaatgagccag
gaaaggctagcacagattctggggcatgctggcaatgggaagtcgctctatgagttcctg
cataatactgtggacatccctgcccctgcacagaaaagtaaatag
DBGET
integrated database retrieval system
