Salmo salar (Atlantic salmon): 106589593
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Entry
106589593 CDS
T04363
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106589593 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106589593 (faap100)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
106589593 (faap100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Motif
Other DBs
NCBI-GeneID:
106589593
NCBI-ProteinID:
XP_014035229
UniProt:
A0A1S3Q5H6
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Position
ssa28:15852684..15857721
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AA seq
901 aa
AA seq
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METRCAVETWAEFGCPSPGTAAKVIWSGEDVLICTGSDEVSVFNTKELKLTAVLQFLSPV
CHMVLSEDKQSVYAVCESDGVYCVSLPTLHPRSPTPPADQSPGPALFKVSSNSLAARDEG
VCSLIEVGGSGGTLVTVSLRDAAWWFTLYKAADHQKLTQFSLPVISVGHHVESEENAAAG
LVMRPVLACVYSSDAPPLSSSSSSSTTTKLPPLSSSSSSLGVKHFLLEPLLFKLLFGVDA
ALINSPMILCGLPDGRLCSLPLLLPGRPGPCVRVLHSMEQPITFIGTTTGTNDGPQCLVA
VGQWGRVVLVRTCEGGPEEGGKVAALTEGCVSGPVVCVCAGREGLYYSTGSDLLALDFPG
VRAAAPNPEESLVVSHRERQGQGQAMVRPRESATLQSPVSLNVCRVIALAGPSHNASGIV
QLVALSLRGRLQRLTLPKGTEAGGIPRLPLSQVGQRVRDLLAAIGDVCERASVLKSTIQS
KNHSLRHLNQVLNVCCLLLANQNSGEQLPVSKKPIRCHVVAKWSRLLQRDSLNLTCVLDN
SSPYVLERNWTFCVRVLPLSYPLPAGGENTSQTFSFPFQKLEPGGRMEVSLPLTAAGDTS
FPVTVSCSLTYSLQSLLGSEELSRLLANGDPASHLGLEGGWISLPLDTLTVDWLDALQVT
GTTPPHRDPNRPSISPDTVSMDVVEAFLSTRKIRGSGRGDGEGEGERMVASDRGLFSASI
KVSTELLRGTLGLEPPGSAGPSQGVCGSVLGWLLSQGTGGEDWRGRGDKGGQESSVVYAR
CLGRHTVKLTAKEVTVGDTSVKEAVEVQVQCSSMAAVCGLHHAVLSRVQALLQGTAGTQE
SSMGVHGLGLRQALQRAQVLSEHLQEARIPEAIGLGMTTEQTTKKLFSVYRQLRENPLLI
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagatgtgctgttgagacttgggctgagttcggatgtccttcaccgggtaca
gctgctaaagtgatctggtctggggaagatgtgttgatttgtactgggagcgacgaggtg
tcggtcttcaacacaaaagagctgaaactgacggctgtccttcagttcctgagtccagtg
tgtcacatggtgctgagtgaggacaagcagtctgtatatgctgtctgtgagagtgatggg
gtgtactgtgtcagtctaccaactctgcaccctaggtctcccactcccccagctgaccaa
tcccctggccctgctctgttcaaggtgtcgtctaattcactggcagccagagacgagggg
gtgtgttctctgattgaggtgggagggtccggagggaccttggtgaccgtctccctgaga
gacgcagcctggtggtttactctctataaagcagctgaccaccagaaactgactcagttt
agtctacctgtcatttcagttggtcaccatgtcgaatctgaggaaaatgctgccgcagga
ctagtgatgcgacctgtgttagcttgcgtttacagcagtgatgcaccacccttgtcatca
tcttcatcatcctcaacaacaacaaaactaccacctttgtcatcatcatcatcctcacta
ggcgtcaaacattttctcctggagcctctcctcttcaagctcctcttcggcgtcgacgct
gccctcatcaactcccccatgatcctttgcggcctgcctgatgggcgtctctgctccctc
cccttacttctcccaggacgaccaggcccctgcgttagagttctacacagcatggagcag
ccaatcacgtttatcggaaccacgaccgggacaaatgatggtccacagtgtttggtggca
gtaggccaatgggggagggtggtgctggtcagaacctgtgaaggggggccggaggagggg
ggcaaggtagcagcattaacagaggggtgtgtgtctggacctgtggtgtgtgtgtgtgca
ggtagggagggcctgtactacagcacagggtcagatcttctagccctggatttcccaggg
gtgcgagcggcagctccaaatccagaagagagcctggtggtcagccacagggagaggcaa
ggccagggacaggccatggtgagacccagggagtctgctaccctacagagtcctgtcagc
cttaatgtctgcagggtcatcgccctggctgggccctcacacaatgcctcaggcatagtg
cagttggtggcattgtctctccgggggaggctccagcgtttgaccctgcctaaggggaca
gaggcagggggcatacccaggctccccttatcacaggtgggacagagagtcagggacctc
cttgcagccatcggagatgtgtgtgagagagcatctgtgttgaaaagcaccatccagtcc
aaaaaccactccctcagacacctgaatcaggtgctcaatgtctgctgcctactgctagca
aatcagaacagtggagagcagctcccagtcagcaagaagccaatcagatgtcacgttgtt
gccaagtggagccgcctgctacagagagactccctgaatctgacctgtgttctggacaat
tctagtccttacgttctagaacggaactggacgttctgtgtgcgagttctaccattatcc
taccctcttcctgcagggggggagaacacctctcaaacattctcattcccattccagaaa
ctagagccgggtgggagaatggaagtgtcgttgcccctaacagcagcgggggacacatct
ttccctgtgacggttagctgctccctcacctactccctgcaaagcctgctggggtctgag
gagctgtcccgcctcctggccaatggggatccggcatctcatctgggattggagggtgga
tggatcagtctgccccttgacacgctgacagtggattggctggacgctctgcaggtgacc
gggaccacgccccctcacagggacccgaacagaccctccatttccccggataccgtctcg
atggatgtcgttgaggccttcctgagcacccgtaagatcaggggttctgggaggggggat
ggagaaggagaaggagagaggatggtggcgtctgatagggggctgttttcagcaagcatc
aaggtctcaacagagctactgagagggacactaggactggagccaccaggttctgctggc
ccttctcagggtgtgtgtggctctgtgctgggctggctgctgtcacaggggacaggagga
gaggactggaggggcagaggggacaagggaggacaggaaagctctgtggtctacgcccgg
tgtctagggcgacacaccgtcaaactcacagccaaagaggtaactgtaggggacaccagt
gtgaaggaggctgtggaggtgcaggtgcagtgctcttccatggcagccgtgtgtggacta
caccatgctgtgttaagccgtgtacaggctctgctccagggtactgctggcacacaagag
tcctctatgggagtccatggactgggcttgagacaggccctacagcgggcacaggtccta
tctgagcatctccaggaggctcgtatcccagaagccattggactggggatgaccacggaa
cagaccaccaagaaactgttcagcgtttacaggcaactcagagagaaccccctcctcatc
ctctga
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