Salmo salar (Atlantic salmon): 106589602
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Entry
106589602 CDS
T04363
Symbol
wipi1
Name
(RefSeq) WD repeat domain, phosphoinositide interacting 1
KO
K17908
autophagy-related protein 18
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106589602 (wipi1)
04136 Autophagy - other
106589602 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106589602 (wipi1)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106589602 (wipi1)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
106589602 (wipi1)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106589602 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
CPSF_A
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
106589602
NCBI-ProteinID:
XP_014035255
UniProt:
A0A1S3Q5K1
LinkDB
All DBs
Position
ssa28:complement(16153157..16162165)
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AA seq
444 aa
AA seq
DB search
MEDRETFDGPGGPQDLISSSFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGVECPDVC
IVERLFSSSLVVVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNIPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDANNLRTVTM
IPAHDSPLAALTFNVSGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
LDAQFLCASSNTETVHIFKLEHHNPSRAGESPTWGAYMGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGHIYIYNIDPQEGGECVFVRKHRLFE
GDEEPQEEQEEEELEDRRSLPPSNSPSYAATVVLPSTPPSSTTLTGYSDRGAEKGDVIPE
HEFTKGPVCLDDENEFPPVSNQSN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgggagacattcgacggtccaggagggccacaagacttgatcagttcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcggtggacaagatggactgcatccatgaaggagtggagtgtccagacgtgtgc
atcgtggagcggttgttctccagcagtctggtggtggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaagaggggaacagagatctgcaactatagctactccaac
aacatcctctcagtcaggctcaacagacagaggctggtagtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctcaagacgctgctcaacataccacacaac
ccctcaggtctctgtgccctctctgtgaaccatggaaactcctacctggcgtaccctggc
agtcagaccatcggagagatcatggtttatgacgccaacaacctgaggacggtgacgatg
atcccagcccatgacagtcccctggcagctctcacattcaacgtgtcaggaactaaactg
gccagcgcctctgagaggggtacagtgatccgagtgttcaccatcccagagggacaaaga
ctgtttgagttccgcagagggatgaagaggtacgtgagtatcagctcgttgtcctttagt
ttagacgctcagttcctctgtgcctccagcaacaccgaaacggtccatatcttcaaactg
gaacatcacaaccccagtcgagcgggggaatctcctacgtggggtgcatacatgggaaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaggac
cgggccttcgccaccgtgcgacttaacatgttcggactcaagaacatctgcgccttggcc
acgattcagaagctgcctcgtctgctggtggcatcatcagatggacatatctacatctat
aacatcgacccacaggagggaggagagtgtgtgtttgtcaggaaacatagactatttgaa
ggagatgaggagccacaggaagaacaggaagaggaggagcttgaggatagaaggtccctc
ccaccgtcaaacagcccatcatatgctgccactgtggttctcccctcaaccccaccctct
tctaccactctcacaggctactcagacagaggggctgagaaaggtgatgtgatccctgaa
catgagtttaccaagggacccgtctgtctggatgacgagaacgagtttcctccagtcagc
aaccagagcaactga
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