Salmo salar (Atlantic salmon): 106589648
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Entry
106589648 CDS
T04363
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106589648
09123 Folding, sorting and degradation
03018 RNA degradation
106589648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106589648
03041 Spliceosome [BR:
sasa03041
]
106589648
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106589648
mRNA degradation factors
5'-3' decay
Lsm complex
106589648
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106589648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106589648
NCBI-ProteinID:
XP_014035357
UniProt:
A0A1S3QL76
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Position
ssa02:complement(54841750..54842941)
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AA seq
75 aa
AA seq
DB search
MIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEDTDSSL
DLGNIRAEPLNSIVH
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgggcaccctgaagggctttgaccagaccatcaacctgattctggatgagagt
catgagcgtgtgttcagttcctctcagggcgtggagcaggtggtcctgggactatacatc
gtcagaggagacaacgttgctgtgattggggagattgacgaggacacagattcttcgctg
gacctggggaacatccgtgctgaaccccttaactctatagtccactga
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