Salmo salar (Atlantic salmon): 106590043
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Entry
106590043 CDS
T04363
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106590043
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
106590043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
106590043
NCBI-ProteinID:
XP_014036020
UniProt:
A0A1S3Q7S0
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All DBs
Position
ssa29:complement(3368777..3454930)
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AA seq
1206 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKAPGSDSDDEDKLHIMEEDGSLADGADCDSNVP
SEDHNGDRWDEVREECGSDGEDDGSTDALVEEILQQGDTTIIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCARGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMSAHKAGRDQRHMTQSGGNRKFKCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCIGVISAVNGRPLPAKASQCPSPAMPASPSSTTRTQIRDKPLQEQ
LPLNQIKSEPMDYEYKPMVVSPVAGATGVNGHGGGMFNGGAAAPLQGAVQAVMLPTMGLV
SPISINLADLQNVLKVAVDSNIIRQMLENNAKSAGTGMGATGVPHQQLISAISLPIMGQD
GNATKIIINYSLDPSQTQTQLTAQNLKKEPQTLATTPGQAQAATEPSSKTQQKLPEDLTV
SKPPRSKEEKMEEETTKTCLLCNECPDGLDTLHTLKHCKKASGLRINGDKSKSAIDSLLS
EGFGDQPKNLLSLLKAYFALNVEPTKEELSKISDSISLPADVVKKWFDKMQSGQVSLGAP
TPPSEEEGPLSECHGAIVVSPKVRSEQDTESPTLMQSSPAEATPAEVNGSGPCPSSPTPL
NLTTGGPVPAKPSSSDSTEVPLDLSLPKPTREETAATAASYQATVYSHQDEPLNLTKTCT
TKKELPLSAGAAGHHVTSQTLSLYTTGQQSANPISIMTTQLPSGTIYAITDQGSTAVPCL
RALTTNNNQTILIPQLAYTYTTTATASSPAGTETQEKTRLQINGIKSAVPTCFKMDTNVP
VPKKAKEERQDTSSEGVSTMEEQNDSDTTPCRKKMRKTESGMYACDLCDKIFQKSSSLLR
HKYEHTGKRPHECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNH
RYSYCKKEAQGGGQGGVGEEVLEIENPVGLGLGEEQQEQSDSRPLSSPPSHLDSDERGSS
TREDEEESDEEDMETVAGEAVEGDPDSVLDMDDIQVVQIGDEGGDEEEEEEEREEGKDTG
QEGGENEEEEEQGVKRIVVGGEEEEGEEEEGVEVKEEQEEKEVTGEKAHTRQEEVKENSE
KEEEHGGEKEQAEKEVEEEQSEQAQEEVKEETMDTEEAVTSEEKEESGEVMKENEGETNG
NTVSED
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcaaatccgaggaggaataacgta
accaactacagtaacgtggtgaaggccccaggctcagattcagatgatgaggacaagctg
cacatcatggaggaggacgggagtctggcagacggggctgactgtgacagcaacgtaccc
agtgaagatcacaacggagaccgctgggatgaagtgagggaggagtgtggttctgatggg
gaggatgacggcagtacagatgctctggtggaggagatactgcagcagggagacacgacc
atcatttacccagaagcccctgaggacgagccccgccaggggacgcctgaggccagcgga
catgacgagaatggcactccggatgcgttctcacagctcctcacctgtccttactgtgcc
cgcggctacaagcgctacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacaccttcgcctaccgcactcagctggag
agacacatgagtgcccacaaagctggcagagaccagaggcacatgacacagtcggggggc
aaccgaaaattcaagtgcactgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgaatccacagcggagaaaagccatacgagtgctccaactgtaagaagcgt
ttctcccactccggctcctacagctcccacatcagcagtaagaagtgcatcggcgtgatc
tcagcagtcaacggccgacccctgcccgccaaggcctcccaatgcccatccccagccatg
cctgcctcgccctcctccaccacacgcacccagatccgagacaaacccttgcaggaacaa
ctacccctcaaccagatcaagagcgagccaatggactacgagtacaagcccatggtagtg
tctccagtagcgggggcaacaggagtgaacggtcacggaggagggatgttcaacgggggt
gcggctgcccctctgcagggcgcggtgcaggcggtgatgctccccaccatgggcctggtc
tctcccatcagcatcaacctggcagacctacagaacgtcttgaaggtggcggtggacagt
aacataatcagacagatgttggagaacaacgctaagtcagcggggactggcatgggggcg
acaggtgttcctcaccagcagctcatctcagccatcagtctgcccattatgggtcaggac
ggcaacgccaccaagatcatcatcaactacagcctggaccccagccagacacagacccag
ctcaccgcccagaacctgaaaaaggagccccagaccctggctacaacaccaggccaggcc
caggctgccacagagccctccagcaagacccagcagaaactcccagaggacctgacagtt
agcaagccccccaggagcaaagaggagaagatggaagaggagactactaagacctgcctg
ctttgtaacgagtgccccgatggtctagacactctccacacactcaagcactgtaagaaa
gcctcaggcctcaggatcaatggggacaaatcaaagtctgccatcgattcattattgtct
gaggggtttggggaccagcccaagaaccttctgtccctcctcaaggcctactttgcctta
aacgttgagcccaccaaggaggagctcagcaagatctccgactcgatcagcctgcctgcc
gacgtagtcaagaagtggtttgacaagatgcagagcggtcaggtctcactaggggccccg
acccctccgtctgaggaagaagggcccttgtctgagtgtcatggggccattgttgtgtcc
cctaaagtaagatcagagcaggacacagagagccccaccctgatgcagtccagcccagct
gaggccactccggctgaggttaacggctctgggccctgcccgtcctcccctacaccacta
aacctgaccaccggggggcctgtcccagccaaaccctcctcctcagacagcacggaggtc
cccctggacctgtcgctaccaaagcccacccgagaggagaccgctgccaccgcggcctct
taccaagccactgtttactcccatcaggacgaacctctgaacttgacgaagacttgcaca
accaagaaagaacttccgctctctgctggcgccgcaggccaccacgtgactagccaaacc
ttgtccttgtacaccaccggccaacaaagtgccaaccccatcagcatcatgaccactcag
ctgcccagcgggaccatctatgccatcactgatcagggcagcacggctgtgccctgcctt
cgggcgctcaccaccaataacaaccagactatcctcatcccacagttggcctacacctat
accactacagctacagccagcagccctgcaggaacagagacacaggagaagaccagactg
cagatcaacggcatcaagtctgctgtccccacatgcttcaagatggacaccaatgttcct
gtacccaagaaggcaaaggaggagcgtcaggacaccagctcagagggcgtgtctaccatg
gaggagcagaatgactcagacaccaccccttgcaggaagaagatgaggaagacggagagt
gggatgtacgcctgcgacctgtgtgacaagatcttccagaagagcagctctctgctccga
cataaatatgaacacacaggcaagagaccccacgagtgtggcatctgcaggaaggccttc
aaacacaagcaccacttgatagaacacatgcgtctccactccggagagaaaccctaccag
tgcgacaagtgtggcaagcgcttctctcactcaggctcttactcccagcacatgaaccac
cgctactcctattgcaagaaggaggcgcagggaggaggtcagggaggtgtaggggaggaa
gtgctggagattgagaaccctgtggggttgggtctgggagaggagcagcaggagcagtca
gacagcaggcccctttcctcccctccctcccacctagactctgacgagcgagggagcagc
accagggaggacgaggaggagagtgatgaggaggacatggagacagtggcaggggaggcg
gtggagggagatccggacagcgttctggatatggatgatatacaagtggtgcagatagga
gatgagggaggggacgaggaggaagaggaggaggagagagaggaggggaaagacactggt
caggaggggggagagaatgaagaagaggaagagcaaggagtgaagagaatcgtggtaggg
ggtgaagaggaggaaggagaagaagaggagggggtagaagtaaaggaagagcaggaagaa
aaggaggttacaggggaaaaggcacatacaaggcaagaggaggtaaaggagaacagtgag
aaagaggaggaacatggaggagagaaggagcaggctgagaaggaggtggaggaggagcag
tcagagcaggctcaggaggaggtgaaggaggagacaatggacacagaggaagcagtgacc
tcagaggagaaggaagaatcaggggaggtcatgaaagagaatgaaggtgaaacaaacggg
aacactgtttcagaagactag
DBGET
integrated database retrieval system
