Salmo salar (Atlantic salmon): 106590053
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Entry
106590053 CDS
T04363
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106590053
Cell adhesion molecules [BR:
sasa04515
]
Cadherins
Major cadherins
106590053
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
106590053
NCBI-ProteinID:
XP_014036036
UniProt:
A0A1S3Q7W0
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Position
ssa29:complement(5061216..5284027)
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AA seq
811 aa
AA seq
DB search
MLTRNCLLLFLWFVFDKGSLSLVRPPGPPLSRSRLGKENPRSLAGSMRNGASGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGESEVKYTLMGEGAGSIFTIDATTGDIHALR
SLDREVKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYIASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGIIRTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSFFHLRVPESSAVGFAVGRIKAHD
LDIGKNAEVEYNVVPGDGDNMFDIITSEHNQEGIIILKRPLDYETKKAYTFKVDASNAHL
DPRFHSLGAFKDTATVKINILDVDEPPVFTKPSYEMDVYEDSPVGDIIGAVTAQDLDASN
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRESIAQHNITIVATKLNSPVLTSRVAV
TIHVLDVNEFAPELAIPYESFVCENAKVGQVIQTFSAKDQDLPQNGHKFSFKPSETDINN
KNFTIRDFGNNTAGIVTLQSGFRRHSQKIYFLPVVIQDSGYPVQSSTGILTIRVCGCESD
GSLLTCSAEAIFLPVGLSTGALIAILLCIVILLVIVVLYVGLRRQKNKETLMTSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLCNPKVIKEKLLKENRDLFRRDIKPETKTGKNQPPVSQ
DSADICNFINQRLKENDVDNSAPPYDSLATYAYEGEGSVAESLSSIESLVADTNDDYDYL
NEWGPRFKTLAGIFGEQSDTQSDTTTTENRL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcctgctgctgttcctttggtttgtcttcgacaaaggttccctg
tctttagtacgcccgccaggtccaccactgagcaggagcagactgggaaaggagaatcca
aggagcctggcgggctcgatgaggaatggggcatctgggtttcagagagtcaagagggga
tgggtgtggaaccagttctttgtgctggaggagtacatggggtcagacccacagtatgtg
ggcaagcttcacactgatctggataagggcgagagcgaggtgaagtacactctcatggga
gaaggggccggctccattttcaccattgacgcaacgaccggggacatccatgccttaaga
agccttgacagggaggtgaagccttattacaccctccgtgcacaggctgtcgatatcgac
accaacaggcccctggagcccgaatcagagtttgtaatcaaggtccaggacatcaacgac
aatgagccaaagtttctagaagggccatacatagccagtgtccctgagatgtcacctgta
gggacttatgtgacgcaggtgacagccacagatgcagatgaccctacctatggaaacagt
gccagagtggtctacagcatcctccatggccagccatacttctctgtggatcccaagact
ggtataataaggacggccttgccgaacatggaccgtgaggtgaaggagcagtaccaggtg
cttatccaggccaaggatatgggaggtcagctgggaggtctggccgggaccaccaccatc
aacattaccctcagcgacgtcaacgacaacccaccaaggttctccaaaagtttctttcac
ctgagagtccctgagtcctctgcggtgggttttgctgtgggaaggatcaaagctcatgac
ttggacatcgggaagaacgcagaagtagagtacaacgtcgtaccgggggatggtgacaac
atgtttgacatcatcaccagtgaacacaatcaggaaggaatcatcattctcaaaaggccg
ctggactacgaaacgaagaaggcctacaccttcaaggtagatgcatccaacgcacacctg
gacccacggttccacagcttaggggcctttaaagacacggccacagtgaagattaacatc
ctggatgtagatgagcctccagtgttcactaagccctcctatgagatggatgtatacgag
gactcacctgtaggtgacatcatcggagcagtcaccgcccaggatctggatgctagcaac
agccctgtcaggtattccatcgactggaagagtgacctggacagctactttgacattgat
ccagtggagggaacgatttccacaaacgaactcctggacagagaaagtatcgcccagcac
aatatcaccattgtggccaccaaacttaatagcccagtgctgaccagtagagtggctgtc
accattcatgtactggatgtcaatgaatttgcccctgaactagcgatcccttacgagagc
tttgtgtgtgaaaatgccaaagtaggccaggtaattcaaaccttcagcgcaaaggaccag
gatctgcctcaaaatggtcataagttctccttcaaaccgtcagagacggacatcaacaac
aagaacttcactatccgcgactttggaaataacacagccgggatagtgactctgcagagc
ggttttcgaaggcattcccagaagatctacttcctgcccgttgtaatccaggacagcggc
taccccgtccaaagcagcacaggcatcctgaccatccgtgtgtgtggctgcgagtcagat
ggatcactcctcacctgcagcgcagaggccatcttcctcccggtggggctgagtacaggg
gctctgatagccatcctcctgtgcattgtcattctactagtgattgtggtcctctacgtg
ggtctgagacgacagaagaataaggagaccctgatgacgtccaaggaggacatccgtgac
aatgtaatccactacgacgacgagggcgggggcgaagaggacacccacgctttcgacatg
ggaaccctctgcaaccccaaagtcatcaaggagaaactcctgaaagagaatcgggacctt
ttccgacgtgacatcaaacccgagacgaaaaccggcaaaaaccaaccgcctgtttcccaa
gacagtgcagatatctgcaacttcatcaatcagcgactgaaagaaaacgatgtggacaac
tcagccccaccctatgactctttagctacctacgcctatgaaggggagggctctgtagct
gagtcgctcagctccatcgagtctctggttgcagataccaatgacgactatgattacctc
aacgaatggggtcctcgatttaagactctggcaggaatatttggagagcagtcggacact
cagtcagacacaacgacaacagaaaacagactttga
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