Salmo salar (Atlantic salmon): 106590117 Help Entry 106590117         CDS       T04363                                  Symbol nphp3 Name (RefSeq) nephrocystin 3   KO K19360   nephrocystin-3 Organism sasa  Salmo salar (Atlantic salmon) Brite KEGG Orthology (KO) [BR:sasa00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sasa03037]     106590117 (nphp3) Cilium and associated proteins [BR:sasa03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    106590117 (nphp3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_NPHP3 TPR_12 NPHP3_hel NPHP3 TPR_10 TPR_1 TPR_7 TPR_8 TPR_2 TPR_MalT TPR_16 NPHP3_N TPR_11 AAA_16 TPR_19 NACHT TPR_6 ATPase_2 KAP_NTPase AAA_22 14-3-3 DUF2225 Uso1_p115_C AAA_14 AAA_19 ARM_TT21_4th DUF4635 XRCC4_CC Motif Other DBs NCBI-GeneID:  106590117 NCBI-ProteinID:  XP_014036187 UniProt:  A0A1S3Q889 LinkDB All DBs Position ssa29:10880750..10907935 Genome browser AA seq 1301 aa AA seqDB search MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV DLEYTAEYERLRKEYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ GIMVYDPDDSDDDDNHTTVTAAGTPCDYWGGGVLGSEPSMGSMMQLQQTFRGPEFAHSLC DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLISTQETQAELDIFTQSYSP RLRSLCEGLGHFYLNICFPEESAASYALERRQEMERSSVCVLLLKSSVTSCVLEDAEEAF VKNPDGHPLVLYLRTVEAHPLSGPTRQLLERVNAADKAAKVKVVDHGGSPEEGASMIYTQ LEKVIKQELLGLEGSDVDGKDSGIDEGREEDSGDVLWDLHDEQEQIEAYQQACSAAAQLG FQKYIDRLNDMVAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKHSPNTLFLYHFVGRPL STSSEPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSSRHQGNIIIIIDSI DQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLNPREVKSVINTEC LAADVKLTKDQDKKLERHCRSASTCNALYVTLLAKMITNCRCAWSLEKTLEQCLLCQDTM SLYSLGLKVALDSLSTDGERHVMREMLCLVCASHNGVSESEVLAVFPDLGLPVLSSLLYT LQRLCIVGLGCGLIRFQHLQAAEAVRLEFMDGGTCSPAYREKLIHYFSQQLSQDRVTWRV ADELPWLLQQQEDRAKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS LKHYEKSCESEDSMIRLGNLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHPSVA LSLHQLAGVYVQWRKYGNAEQFYKQALEISENAYGSDHACVARELDSLAMLYQKQNKYEQ AEKLRKRSVRIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDTADCAKTFNELGVLYYL QNNLEAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDIR KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALDIREKSFGPKHPSVATALVNL AVLYCHLKKHSEALPLYEQALRVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELYK RAMEIKEAEPSLVCGKAPSRHSSSGDTFSLRGPAPLPHAPR NT seq 3906 nt NT seq  +upstreamnt  +downstreamnt atgggtacagcctcctccctggtgagccctggggaggtgatagaggatgcgtatgggggc gagggtggggaggcctgtgagatacctgtggaggtcaaacctaaagcccgcctcctgcgg agctcctttcgccgagggcccagggtgattggggccagcttcaaatctacaggctctgtg gacctggagtacaccgccgaatacgaacggctccgcaaggagtatgagattttccgggtc agcaagaacaatgagatcacctccatgcagaagaaggaggccaagctggacgaggagaac aagaggctgagagctgagctgcaggctctgcagaagacctaccaaaagatcctgagggag aaggagagtgccctggaggctaagtaccaagccatggagagagctgccacctttgagcac gacagggacaaagtcaaacgacagtttaagatcttccgggagaccaaagagaaggagatc caggacctgctgcgagccaagagggacttggaggccaagctacagcagctgcaggctcag ggcatcatggtgtacgacccggacgactcggatgacgatgacaaccacaccactgtcacg gctgcagggactccgtgtgattactggggtggtggagtgctgggcagtgagccctctatg ggcagcatgatgcaactgcagcagaccttcagaggaccagagtttgcccacagcttgtgc gatgtggagggcccgtttgccaatgtcagcagagatgactgggacgctgctgtggccagt ctgctgcaggtgtctcctcacgtgtcccaggcgttatggagcaacacggtgcgctgctac ctgatctctacccaggagacacaggctgagctggacatcttcacccagagctactctccc aggctgcggagtctgtgtgaggggctgggccatttctacctgaacatctgtttccctgag gagagtgcagcctcctatgcactggaacgcagacaggagatggagaggagctctgtgtgt gtgctcctccttaaatcctccgtcacgagttgtgtgttggaggatgcggaggaggccttt gtgaagaacccagacggtcatcccctggtactctacctcaggaccgtggaggcccaccct ctcagcggccccaccagacaactgctggagagggtcaacgccgcagacaaggcagccaaa gtcaaggtagtggaccatggtggctccccagaggaaggagcgtctatgatctacactcag ctggagaaagtaatcaaacaggagctgctgggtttggagggcagcgacgtggacggtaag gattcggggatagacgaggggcgcgaggaggattcgggggacgtgctgtgggacctgcat gatgagcaggagcagatcgaggcctatcagcaagcctgcagcgccgcagctcaactgggc ttccagaagtacatagatcgtctgaacgacatggtggcagcccctccacccacccctcca ctgctggtatcagggggacccggctctgggaagtctctcctgctgtccaaatggattgag ctgcagcagaagcactcccccaacacgttgttcctgtaccattttgtggggcgacctctt tccaccagctctgagcccgtactcattattaaacgcctcactgtcaagctgctgcaacat ttctggtccatctctgggttatccatggacccctccaagatcctagaggagttccctcgc tggctagagagactgtcttccagacaccaaggcaacatcatcatcatcatcgactccatt gaccagatacagcaagcagagaggcacatgaagtggctgatcgaccccttgccggtcaac gtcagagtggtggtgtctgtcaacgtggagacctgtccccaggcctggagactgtggccc accctccacctggaccccctgaaccccagagaggtgaagagtgtcatcaacacggagtgc ctggcagctgacgtcaaactcactaaagaccaggataagaaactggagagacactgtcgc tctgcatccacatgtaacgccctgtatgtcaccctgctagccaagatgatcaccaactgt aggtgtgcctggtcgttggagaagactctagagcagtgtctgctgtgtcaggacaccatg tctctgtacagcttgggcctcaaggtggcgctagattctctcagcacagacggggagaga cacgtcatgagagagatgctgtgtctggtgtgtgccagtcacaacggtgtgagcgagtcg gaggtgctggcggtgtttccagacctgggcctgcctgtcctctcctccctcctctacacc ctacagagactctgtatcgttggcctgggctgtggactcatcaggttccagcacctacag gctgcggaggccgtccggctggagtttatggatggagggacctgctctcctgcctacaga gagaagctcatccactacttcagccagcaactcagtcaggacagggtgacatggcgggtg gcagacgagctgccctggctactccagcagcaggaggacagggccaagctgcagctcagc ctccttaacctctttgtctcccagaacctctacaagaggggccatttctctgagctgctg gcctactggcagtatgtgggcaaagacaagagctccatggccactgagtactttgactct ctgaagcactatgagaagagctgtgagagtgaggacagcatgatcaggctgggcaacctg tatgagacactgggtcgcttcctcaaagacttgggcctgctcagtcaggcggtagctccc ttacagaggtctctggagatccgggagacggccctggacccggaccaccccagtgttgcc ctgtccctacaccagctggccggggtttatgtccagtggaggaagtatggcaatgcagag cagttctacaagcaggccctggagatcagtgaaaacgcctacggctcagaccacgcctgt gtcgcacgcgaattggactccctggccatgctctaccagaaacagaacaagtatgagcaa gccgaaaaattgaggaagaggtctgtgaggattcgccaaaagactgcccgccagaaaggc catatgtatggcttcactctgctgcgtcggcgggccctccagttagaggagctgactctg ggtaaagacacagcagattgtgccaagaccttcaacgagctgggagtcctctactacctc cagaacaacctggaggcggccaaagtgttcctgactcgttctctggagatgcgtcagcgt gtgttggggccggaccaccctgactgtgcccagtccctcaacaacttggcggccctacac actgagaggagagagtacgagaccgcagaggacatgtacgaaagagccctggacatccgg aagagagccctgtcccctgaccacccctccctggcctacaccctgaaacacctggcaatg ctctacaaacgcagggggaagctggagaaggctgttcctctgtatgagctggctctggac atcagggagaagagttttggaccaaaacaccccagtgtggccacagcattggttaacctg gctgtactctactgccacctgaagaagcacagtgaagcgctgcccctgtatgaacaggct ctcagagtgtatgaggacagtctgggacgctcacacccacgtgtcggagagacgctgaag aacctagctgtactcagctatgaggagggggactttgagaaagcagcagagctctacaag cgagccatggagatcaaagaggcggagccatctctggtgtgtgggaaggccccgtctcgg cactcgtccagtggggacacgtttagcctacgagggcccgcccctctcccacatgccccc aggtga

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