Salmo salar (Atlantic salmon): 106590166
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Entry
106590166 CDS
T04363
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
sasa04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106590166
04114 Oocyte meiosis
106590166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106590166
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sasa00535
]
106590166
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106590166
Meiosis-specific proteins
Cohesin complex and associated proteins
106590166
Proteoglycans [BR:
sasa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106590166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
MFD_D3
Motif
Other DBs
NCBI-GeneID:
106590166
NCBI-ProteinID:
XP_014036316
UniProt:
A0A1S3L6E3
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Position
ssa02:complement(56384648..56412344)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKSNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLQTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRHLRDAQQDARDKVEETERVVREKKSKISAMKEEKEQLSSERQEQIK
QRTKLELKSKDLQEELAGNSEQKKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEREER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILTEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSQQFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTMLTATSSELEGINKRIKDTLARSEDLDVLIDKAEIEVKDHAKS
MDRWKNVEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELERGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGTDSEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ISAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttacagggaccagactgtggtg
gatcctttcagtccaaagtccaatgtcatcgtgggaagaaatggatctggaaaaagtaac
tttttctacgccattcagtttgtgctcagtgatgagttcagccatcttcgccccgaacag
cgcctggccttgctccatgagggaactggtcctcgtgttatctcagcttttgtggagatt
atatttgacaattctgacaacaggttgccgatcgacaaagaggaggtgtccctccgccgt
gtcatcggcgccaagaaggaccagtacttcttagacaagaagatggtgactaaaaatgat
gtcatgaacctcttggagagtgctggtttctcccgtagtaacccctactacatcgtcaag
caggggaagattaaccagatggctacagcccctgattcccagcgtctgaagctgctgcgt
gaggtggcaggaaccagggtgtacgacgagcgcaaggaggagtccatctccctcatgaag
gaaacagagggtaagagagagaagatcaatgagctgctgaagtacattgaggagcgtctc
cagaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agggctctggagtacactatctataaccaggagctcaacgagacacgcgccaagctggac
gagttgtcctccaagagagagacctgtggagacaagtccagacatctgagagatgcccag
caggatgccagagacaaagtagaggagacggagcgtgtggtgcgtgagaagaaatctaag
atcagtgccatgaaggaggagaaggagcagctgagctcagagagacaggagcagattaaa
cagaggaccaagctggagctcaaatccaaagacctgcaggaggagctggccggcaacagc
gaacagaagaaacgtctactgaaggagcggcagaagctgctagagaagatagaggagaag
cagaaggagctgcaggagactgagcccaagttcaacactgtgaaggagagggaggagagg
ggcatcgccagactggcccaggccacccaggagagaacagacctgtacgccaagcagggc
cgtggcagccagtttacttctaaagaggagagggacaagtggatcaagaaggaactcaag
tccctagaccaggccatcaatgacaagaagaggcagattgctgccatccataaagacctg
gaggacactgagaccaacaaggagaagaacctggaacagtatagtaaactggaccaggac
ctgaatgaggtgaagaccagggtggaagagctggacaagaaatactacgaagtcaagaat
aagaaggacgagctgcagagcgagagaaactatctgtggcgggaggagaacgctgagcag
caggccctggcagccaaacgagaggagctggagaagaaacaacagctccttagagcagcc
accggcaaggccattctgaacggtattgacagcatcaacaaggtgctggagcatttccgc
agaaaggggatcaaccagcacgtcatcaacggttaccatggcatcgtcatgaacaacttt
gagtgtgagcccgccttctacacctgtgtggaggtcactgcgggaaccaggttgttctac
cacatagtggagacagatgaggtgagcaccaagatcctgacggagttcaacaagatgaac
ctgcctggagaggtcaccttcctgcccctcagcaagctggatgtcagggacaccgcctac
cctgagaccaacgatgccatccccatgatcagcaagctgcgctacagccagcagtttgac
aaggccttcaagcacgtgtttggaaagaccctgatctgtcgtagcatggaggtgtccact
cagctggccagggcattcaccatggactgtataactctggagggtgaccaggtgtcccac
cgcggggcgctgacagggggttactatgacaccaggaagtcacgtctggagctgcagaag
gacatgaggaaggctgaggaggagctgggagagctggaggccaaactcaatgagaacctc
cgcaggaacatcgaacgtatcaacaatgagatcgaccagctgatgaaccagatgcagcag
attgagacccagcagaggaagttcaaggcttccagagactccatcctgtctgagatgaag
atgctcaaggagaagaggcagcagtccgagaagacgttcatgccgaagcaacgttcactg
cagtctctagaggccagtctccatgccatggagtccaccagggagtctctgaaggctgag
ctggggacagacctgctctctcagctcagtctggaggaccagagacgtgtggatgacctc
aacgacgagatcagacagctgcagcaggacaacaggcagctgctgaatgagaggatcaag
ctggaggggatcatgaccagggtggagacgtacctcaacgagaacctacggaaacgcctc
gaccaagtagaacaggagttgaatgagctgagagagactgagggaggcaccatgctcaca
gccacctcctcagagctggagggaatcaacaaacgcatcaaagatacactggcacgctca
gaggacctggacgtgttgatcgacaaggcggagattgaggtcaaggaccacgccaagagc
atggaccgctggaagaatgtagagaaggaacagaacgacgccatcaaccatgacaccaag
gagttggagaagatgaccaaccgacagggcatgctgctgaagaagaaagaggagtgcatg
aagaagatcagggagctggggtccttaccacaggaggccttcgagaagtaccagaccctc
acgctcaaacagctgttccgtaagctagagcagtgcaacacagagctgaagaagtacagc
cacgtgaacaagaaggccctggaccagtttgtcaacttctctgagcagaaggagaagctg
atcaagcgccaggacgagctggagcgaggacacaagtccatcatggagctcatgaacgtc
ctggagctcaggaagtatgaggccatccagctcacattcaaacaggtgtctaagaacttc
agtgaggtgttccagaagctggttccagggggcaaggccaccctggtgatgaaaaagggt
gacacggaggggggtcagtcccaggacgagggggaggggggcaccgacagcgagaagggc
tcaggctctcagagcagtgtgccctctgtagaccagttcaccggagtcggcatcagggtg
tcgttcacggggaagcagggggagatgagggagatgcagcagctctctggaggtcagaag
tccctggtggccctggccctcatcttcgccatccagaagtgtgaccccgctcctttctac
ctgtttgatgagattgaccaggccctggatgcacagcacaggaaggctgtctcggatatg
attgtagagctggcgggccatgcccagtttatcaccactacgttcagacctgagcttctg
gagtcagccgacaagttctacggagtcaagttcagaaacaaggtgagtcacattgacgtg
atctcggcagagcaggcgaaagactttgtggaggacgacactacccatggttaa
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integrated database retrieval system
