Salmo salar (Atlantic salmon): 106590168
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Entry
106590168 CDS
T04363
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106590168
04121 Ubiquitin system [BR:
sasa04121
]
106590168
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106590168
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
106590168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
106590168
NCBI-ProteinID:
XP_014036317
UniProt:
A0A1S3Q8L5
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Position
ssa29:13273443..13299156
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AA seq
1122 aa
AA seq
DB search
MAEGSVTDSLGLNPDEASSRQKCNQQQSRRGRNREGHNRNWSGSNNYGPAPQQQQQGHFH
HGVKQSHVQDNSTVPVNFHPPPYHQEDAPRGRGRGGGRGASGGGRGSRGQPPRWNRPGVD
TGPPGLPRGHHGLGGGGGYRPGTPPIDGPSWRRGDPGGRSGEVGPAHEDHQDTRPEKPRR
FSQEPRREDRGARSAKGPPHSLEKQENQDSHATGGGGWDLAEPREETPPSEMGARSRKGG
RAEERNPHVDAQQKFPEPKRRQGPIKEYPQEKDHERGARDAPSGHRDKLGSGTEEEPSWR
SQGRGQGRRTPLQDRGQRRTLNSDHRPGQKRWDNVPNKSKETQTGCLIEQLSEEKYECMV
CCEVIRVMAPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNIY
KCFCGKATNPEFQRSEIPHSCGDMCGKKRSGADCRHPCNILCHPGPCPQCPASVTKACIC
GRTSQPMRCGQATAIHCDKQCGATLNCSEHTCTQVCHSGLCQPCPLQVKQVCYCGVVSRE
VLCGTDKDRFDGSGHFCCQKACGKMLDCEAHRCEQVCHPGPCKPCPRSPRLVRSCPCGQT
ALAKLLELGYPERRGCSDPIPSCGKTCSKPLPCGSSETIHICEKLCHEGSCGPCSLTSTI
KCKCGSKTKDVPCAAIQNEEGLIFTCEKRCLKKRSCGRHKCGELCCVGAEHKCSLICGYK
LNCGLHRCQELCHRGNCQPCWQTSFDELACHCGVSVLFPPIACGTKPPECKNPCTRRHEC
DHPVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLACNKVLLCDLHRCR
RICHRAECLAEGVCRQPCLLPRPNCGHPCNAPCHKGTSCPRNTCTAKVALQCDCGRRKET
VVCTEAASAHQRYAAIAMASKLCDMQLGDSVDMGLITKKEMKHTKLECDEGCAALERNRR
LAEALQIDPSVDPFNMRSSSSTYSDSLRVDARKDFKFVSEVEEEIKNLVELTSKGKQSKR
SHCFPPMNREHRKLVHELAEAYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLMERD
TAVPRAPPPIAHIKHSSKADSVSSWSKAVKEEPVIDYFDVQD
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctgggtttgaatccagatgaggcttcgtcacga
cagaaatgtaaccagcagcaatccaggaggggtcggaacagagagggccacaaccgtaac
tggagtggttctaataactacggcccagcaccgcagcagcagcagcaaggccattttcac
catggggtcaaacaatctcacgtccaggacaattcaacggtccctgtaaatttccatcct
cctccctaccaccaagaggatgcaccaaggggtcgaggaagaggaggaggaagaggggct
agtggagggggccggggctcaaggggccagcctccaaggtggaataggcctggggttgac
actggcccccctggtttacccaggggccaccatggactgggtggtggtggtggctacagg
cctggaacaccccccatagacgggcctagctggcgtcgaggagaccctggcggccggagc
ggagaggtggggcctgcccacgaagaccaccaggacacccgccctgaaaagccccgacgg
ttcagccaggagccgcggagagaagacagaggggcgaggagcgcgaaaggacctcctcac
tctctggaaaagcaggagaaccaggacagccacgctacaggaggaggaggctgggacctt
gctgagcccagagaagaaaccccaccatcagaaatgggggccagaagccggaaaggaggg
agagccgaggaaaggaacccccacgtcgacgctcaacagaaattccctgagcccaagcga
cgccaggggcctatcaaagaatatccccaggagaaggaccatgagaggggagccagagac
gccccctctggccatcgtgacaaactgggctccggcactgaagaggagcccagctggagg
agtcaggggagaggccaggggagacgcacccccctacaggacagaggccagaggagaaca
ctcaactcagaccacaggcctggacagaagaggtgggacaacgtgcctaacaagagcaag
gagactcagacaggttgcctgatcgagcaactgtctgaggagaagtatgagtgcatggtg
tgctgtgaggtgatcagagtcatggctccagtctggagctgccacagctgcttccacgtg
ttccatctcaactgcatcaagaagtgggcccgctccccagcctcccaggcagacgaaaca
aatgacgggtggcggtgtccggcctgtcagaatgttgtcttccaacccccgaacatctac
aagtgcttctgtggcaaagcgaccaacccagagttccagcgtagtgagatcccacacagc
tgtggagacatgtgtgggaagaagaggagcggagcagactgcaggcacccctgtaacatt
ttgtgtcaccccggaccttgtccccagtgtcctgcttctgtcaccaaagcatgcatctgc
ggaagaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcag
tgtggcgccaccctcaactgttcggaacacacctgtacccaggtgtgccacagcggactg
tgccagccttgcccgctacaggtcaaacaggtgtgctactgcggcgtcgtgtctcgggag
gtactctgtgggacggataaagaccgctttgacggctccggacacttctgctgtcagaaa
gcatgtggcaagatgttggactgtgaggcccaccgctgtgagcaggtgtgccaccctggg
ccgtgcaagccgtgcccacgctcccccaggctagtaaggagctgcccctgtgggcagacg
gccctcgccaagctcctggagctgggctaccccgaacgccgcggctgctccgaccccatc
ccctcttgtggcaagacctgcagcaagcctctgccctgcggctccagcgagaccatccac
atctgtgagaagctgtgccatgagggaagctgtggtccctgctcgctcacctccaccatc
aaatgcaaatgcggctctaagaccaaggatgttccctgtgcagccatccagaatgaagag
ggactgatttttacttgtgagaagcgctgcctcaaaaaacgctcctgtggccgacacaaa
tgtggcgagctgtgctgtgtgggtgcggaacacaagtgctctctgatctgtggctacaag
ctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccctgc
tggcaaaccagttttgatgagctggcgtgccactgtggggtgagtgtcctgttccccccc
atcgcctgtggcaccaagcccccagagtgtaagaacccgtgtaccaggaggcacgagtgt
gaccacccagtgttccacaactgccacagtgaggagaagtgcccaccctgtacctatctc
actcagaagtggtgcatgggaaagcatgagcgaaggagcaacatcccgtgccaccttcag
gacatctcctgtggcctggcctgcaacaaggttctgctgtgtgacctccaccgctgccgc
cgcatctgccaccgggccgagtgtctggccgagggcgtctgccgccagccctgcctgctg
ccccggcccaactgtggccacccctgcaacgccccttgccacaagggcaccagctgcccg
cgcaacacctgcactgccaaggtggcgctacagtgcgactgcggtcggagaaaggaaacg
gtggtgtgcacggaagcagccagcgcccatcagaggtatgcagccattgccatggccagt
aagctgtgtgacatgcagctgggtgactctgtagacatgggtcttatcactaagaaggag
atgaaacacaccaagttggagtgtgacgaggggtgtgctgcactggaaaggaacaggcga
ttggctgaggccctgcagattgacccgtcagtggaccccttcaacatgcgctcctcctcc
tcaacgtacagtgacagcctcagagttgacgccagaaaagattttaagtttgtcagcgag
gtagaagaggagatcaagaatctggttgagctgaccagcaagggtaaacagtccaagagg
agccactgcttcccccctatgaaccgggagcacaggaagctagtccacgagctggccgag
gcctacaacgtggagagtgtgagctacgacagcgagcccaaacgcaacgtagtcatcacc
gccatcagggggaagtctgcctgtcctaactcaaccctgacctccctgatggagagagac
actgcggtcccgagagctcctccacccattgcccatatcaaacatagcagcaaggctgac
agtgtgagcagctggtccaaggcagtcaaagaagagccggtgatcgactacttcgatgtc
caggattaa
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