KEGG   Salmo salar (Atlantic salmon): 106590262
Entry
106590262         CDS       T04363                                 
Symbol
dcaf11
Name
(RefSeq) DDB1 and CUL4 associated factor 11
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sasa04121]
    106590262 (dcaf11)
Ubiquitin system [BR:sasa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106590262 (dcaf11)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_WDR19_1st PROPPIN Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 106590262
NCBI-ProteinID: XP_014036556
UniProt: A0A1S3Q9D0
LinkDB
Position
ssa29:20083417..20099329
AA seq 541 aa
MGSQSSSGMSGGRGSSGNPDQSESESNQSSSSNNSNSSRSRRSAEGQQVDRQSTAEEDVD
LAQVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGDRYNPPVDSQPDT
QELDRSEIRTRILLTTASSDLKGRQSFTHMLTEREQGRCRGSSFSHGECSRIRSHFLPNH
VTHKDTYQQKAFCGVYSDDGNMFLSACQDQNIRLYDTSSGRFNLKQTVKARDVGWSVLDV
CFTPDSHNVLYSSWSDYIHVCSVDGDSETHTALDLNPDERRFCVFSLAASTDGKEILGGA
NDGCLYVFDREQNRRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLREDR
PQPVGQLSGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQN
WDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFTTGQRFIYTGCSTGK
IIVYDVLTGSVVTRLSEHDACVRDVSWHPYQDNIISSSWDGAVRVWEHRQTHPLDEERER
D
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgggctctcagtctagttctgggatgtccggcggtcggggctccagcggcaaccctgac
cagtctgaatcggaatccaaccagagcagcagcagtaataacagtaacagcagtagaagt
cgcagatcggctgaggggcagcaggttgacaggcagtcaacagcagaggaggacgtcgat
ttagctcaagtgctggcttacctattgaggaggggccaggtgaggctggtccatgggagt
ggagcaacaggcctgcagctcgtccagtcgtattcagactctgacgaggacagcgatggg
gcttgggaggggcgtctaggagaccgttacaaccctcccgtggactcccagccagacact
caggagttggaccggagtgaaatccggactcggatcctcctgaccacggcctcatctgac
ttgaaaggcaggcaaagcttcacccacatgctaacagagagggaacaaggccgatgtcga
ggctccagtttttctcacggagagtgtagtcgcattcgctcacatttcctgcccaatcat
gtgacacacaaggacacataccagcagaaagcgttctgtggtgtgtacagtgacgatggc
aacatgttcctctctgcctgccaagaccagaacatccgtttgtatgacaccagtagcggg
cgctttaacctgaagcagactgtgaaggccagggacgtgggctggagcgtgctggacgta
tgcttcacccccgactcccacaacgtgctctactccagctggtctgattacattcatgtc
tgcagtgtagatggagacagtgaaacccataccgccctggacctcaacccagacgagagg
aggttctgtgtcttctctctggctgcctccacagacggaaaagagatccttggaggagca
aatgatggctgcctctacgtctttgatcgtgaacagaataggagaacccttaagattgat
gctcacgaggatgacgtgaatgcggtggcttttgctgacagctcgtcccagctgttgttc
tcaggcagcgacgacgcgctctgcaaggtgtgggacaggcggacgctgcgggaggacaga
ccccagcccgtgggccagctgtctggacacagagatggcatcaccttcatacacagcaag
ggcgatgcacgttatctgatcagtaactccaaggaccagtccatcaagctgtgggatgtg
aggaagttctcccccaaggagggcctggcggcctcgcggctggccgttacccagcagaac
tgggactaccgctggcagcaggtgccccagagagccctgaagagacacaagctgaccggc
gacacctcggtgatgacctacaggggtcacggtgttctgcacacactcatacgctgccgt
ttctccccggagttcaccaccggacagaggttcatctacaccggctgctccactgggaag
atcattgtctatgacgtgctgacgggcagcgtggtgaccagactctctgagcatgacgcg
tgtgtgagggatgtcagctggcatccctaccaggacaacatcatcagcagctcctgggac
ggagcagtgcgtgtttgggagcacaggcagacccacccactggatgaggagagggagagg
gactga

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