Salmo salar (Atlantic salmon): 106590291
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Entry
106590291 CDS
T04363
Name
(RefSeq) zinc finger CCHC domain-containing protein 2-like
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
106590291
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
Vts1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
106590291
NCBI-ProteinID:
XP_014036610
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All DBs
Position
ssa29:complement(17885825..17955076)
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AA seq
1149 aa
AA seq
DB search
MLKMKLPMRTAEAGGDDTAEEQPDLHIPRSVSDKPEGSSRHPGYPSQLDKETVFEWFGLH
LNPAKRIEFMCGLLHMCQPLELRFLGSCLEDLARKDNHVLRDVEIRANNPNDLTILSDVI
DPVVRSKLLVCLSLLGSDSRECAGILFRILSHVDPSLLYKNYGYSVSPFKDSQHHPFHSP
CVDGKAFGRTEQNCGLPMEAAIGPLEQLALLFTMASLHPAFPFHQREKVIEQLDKIQLAI
EDERQQNQRRINAQHNKAQKAEEHGPAAVTIEASLGERTQAQGPAHHASQTPPSRRAQRE
AVHVEKIVLKGISRRRSDREYNFVVTWSDSSSSNVTKTHLELESFLLKLPKEQSTESFEK
GILRLLNQGDQYEIREVEGNLKEKFLSAPQAFRQTSKVCGFFLCESSSSSPSCSRFNPVA
LGKPYKEDCSEASSQEEGVYLEPYVQGHRKKHGSKSPSLNIPNAKSSQGESSRRGPHGLE
HNGLPDWRRKSCTLKPNQDTSGGLGPEQHQDSEKRSSHPATKSKPRALGPDREKGKKGEG
RAAYLTNGSIVPPASQRTRQSTGKGCVCPDGRLVGGSSQDVYGDTSSESYSSPSSPQHDG
PESLDSEDEKDKDTDSHSDDSSSQGRADAFFSCQEVAGGGLPTIHPLASAKPAGEPLCPE
TIPNFPPITFMQPLPYILPNGALPADASLPVLPPQVAAALVDNKVVGGLIMQVPLVLREP
MPTPVPTPVPGDTEKRDALAAVPVVLPGFGSPTLGLHPPGSPALQPLIQRFKTAPHKATV
TSEGVTASSAHHPPVGAISVIAPGPPYASPLQPAYPDPAANPLTPSVPLGEPSIPHAKHP
GMALPSGLPSPYTMPPIPTSIMATLGAGVAGVGVVPTAGQVQAVVPPSVPTHNPGPVPSP
SPALTHSTAQSDSTSYINSTSCASNLVAQPQQQQQQQQATPQQQPMCCGACGCRGGCGTS
NNSHTAPSFFFPHQMPPRQVFGVPPIFQLTSLCNSSYLSQPPPQSNGQAQLPFFPSAPAP
YASQTLLHTHPHSHTDHLLGTQQGYSLQQMAPYNRFYPHMYPSSVGMVPGAGGGGALGVA
VGVNKKNANVSCYNCGVSGHYAQDCIQPSIDSTQQGNNATARGRVERGGAAAGLFGRPPP
PPLQHFPPK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaatgaagctgcccatgagaacggcggaggcaggaggagacgatacggccgag
gaacagcccgatctccatattccaagatcggtctccgacaagcccgaaggttcctccaga
cacccaggatatccatctcaattggataaagagaccgttttcgagtggtttggtttgcat
ttaaatcctgccaagcggatcgagtttatgtgcggactgctccatatgtgccagccactt
gagctccggtttttgggctcctgtctggaagacctggctcggaaagataaccacgttcta
cgggatgtcgagataagggccaacaatccgaatgatttgaccattttatcagatgttatc
gaccctgtcgtgcgctccaagctgctggtctgcttgtctcttctgggatctgacagcagg
gagtgtgcgggaatactatttcggatattgagccatgtggatccctccttgttatacaaa
aactatggctactctgtttcgcccttcaaggactctcaacatcacccgttccattctccg
tgtgtggacgggaaagcgttcgggagaacagaacagaattgcgggcttccaatggaggca
gcgatcggacccttggaacagttggcgctgctttttactatggcctccttgcatccagcg
ttcccgtttcatcagagagaaaaagttatagaacagctggacaaaattcaacttgctata
gaggacgagagacagcagaatcagcgcagaataaacgcccagcacaacaaggcccagaaa
gcagaggagcatggcccagcagcagtcaccatcgaggccagtctgggtgagaggacgcag
gcacagggaccggctcaccacgccagccagacaccccccagcagaagggcccaaagggaa
gccgtgcatgtagagaagatcgtgttgaaggggatctcacggaggaggtcagacagggaa
tacaattttgtggtaacctggtccgactcctcatccagcaatgtcaccaaaacacatctt
gaactggaaagcttcttgctgaagcttccgaaggagcaatccaccgagtcgtttgaaaag
ggcatcctccggctactcaaccagggagaccagtacgagatcagggaagtggaggggaac
ctcaaggagaagtttctgtcggctccacaagctttccgacagacaagcaaggtctgtggt
ttcttcctgtgtgagtcctcctcctccagccccagctgcagcagatttaaccctgtggcc
ctagggaagccatacaaagaggactgctcagaggcatcaagccaggaggaaggtgtgtat
ttggagccgtacgttcaggggcaccggaagaaacatggcagcaagagccccagccttaac
attcccaatgccaaaagttcccagggggagagcagtcggagggggccccacggcttggag
cacaacggcctgccagactggaggaggaagagctgtacgctcaaacccaaccaagacacc
tctggggggctgggcccagagcagcatcaggacagtgagaagaggagcagccaccctgcc
accaagagcaagccacgagcactgggaccagacagggaaaaggggaagaaaggagaagga
agagctgcctacttgacgaacgggagcatagtgcctccggcttctcagcgaacgcgacaa
tcgacagggaaaggttgtgtgtgtccagacggtcgtctagtcggaggctccagtcaggac
gtgtacggagacacctcgtcggagagctacagctccccctccagcccccagcacgatgga
ccagagagcctggacagcgaggacgagaaggacaaagatacagatagtcactcagacgac
tccagcagccagggtagagcggacgccttcttctcctgccaggaggttgcagggggaggc
ttgcccaccatccatcccctggcctctgccaagcctgctggggagcccctctgccccgag
accatccccaactttccccccatcacctttatgcaacccctgccctacatactgcccaac
ggagcactgcccgccgatgcctctctgccagtcctgcctcctcaggtggcagcggccctg
gtagacaacaaggttgtgggaggactgatcatgcaggtgcccttggtcctccgagagccc
atgcccaccccagtgcccactcctgtgccaggggacacagagaagagggatgcccttgct
gcagtgcccgtggtgcttccagggtttggctcccccaccctgggcttacacccccctggc
agccctgccctgcagcccctgatccagcgcttcaaaacggcccctcataaggcaactgtc
acttccgagggtgtcaccgcctcctctgcccaccaccccccggttggagccatcagcgtc
atcgcccccggcccaccctacgcctcacccctgcagccagcctaccccgaccctgccgcc
aaccccctaaccccttctgtacccctaggggagcctagcatccctcacgccaagcacccg
ggcatggctcttccctcaggcctgccctctccatacaccatgccccccatccccacctcc
atcatggcaacgctgggggcaggggtagccggagtaggggtagtgcccacagctggacag
gttcaggcggtggtgcccccatccgtgcccacccacaaccccggtcctgtgcccagcccc
agccctgcccttacccatagcacggcacagagcgactccacctcctacatcaacagcacc
agctgtgccagtaacctcgtcgcgcaaccacaacagcagcaacaacagcagcaggcgact
ccccagcaacagcccatgtgctgcggggcgtgcggttgccggggaggctgcggcaccagc
aacaacagccacacagcgccttcattcttcttcccccaccagatgccgccgcggcaggtg
ttcggtgtgccgcccatcttccagctgacgtccctgtgcaacagcagctacctcagccag
cctcccccccagagcaacggccaggcccagctacccttcttcccatccgccccggccccc
tacgccagccagaccctgctgcacacgcacccccactcccacactgaccacctactgggc
acacagcaaggctacagcctccagcagatggcaccctacaaccgcttctacccgcacatg
tacccctccagtgtgggcatggtgcccggggcgggaggcggaggtgcactgggggtagca
gtcggcgtcaacaagaagaacgccaacgtctcgtgctacaactgtggggtcagtggccac
tacgcacaggactgcatacagccctccattgactcgacacagcaaggtaataacgccacc
gccaggggcagggtggagcggggaggggcggccgctggcctcttcggacggccccctccg
ccccccctgcagcacttcccccccaagtag
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