Salmo salar (Atlantic salmon): 106590345
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Entry
106590345 CDS
T04363
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106590345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106590345
03036 Chromosome and associated proteins [BR:
sasa03036
]
106590345
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
106590345
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106590345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
SAM_PNT
DUF5431
Motif
Other DBs
NCBI-GeneID:
106590345
NCBI-ProteinID:
XP_014036737
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All DBs
Position
ssa29:complement(21487205..21635408)
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AA seq
692 aa
AA seq
DB search
MRTTAAREPYSSCHNIEGQNDSRVESILSQMMQAEDRKKRSFSKGVAEEYCLRERPNEDT
VKMKNKVTSTQAVRGKKKAWSWDQYLGEEKVIAAPLRLFTEAQSFPLSRNGFKVGMRLEG
IDPLHPSMFCILSVAEVIGYRLRLHIDSYSECYDFWVNADSPDIRPAGWCESTGHQLHPP
KGYNESEFNWEKYQEACNAEAAPKNLFKSQNGTTSTSKFQVGMKLEAVDRKNPCLVCVAS
VADIVDNHFLVHFDNWDDTYDYWCDASSPHIHPVGWCQDHGRPLTAPQGHPNPEHFLWEE
YLQDNGSTAVPSQAFCMRAPHSFQVNMKLEAVDRRNPMLVRVATIADTEDYRVKIRFDGW
HEKFDFWVDSDLPDLHPVGWCARTGHPLEPPLSHAGPSDLKSSVTQGVCPTPGCRGVGHI
KGAKYTGHHSAFGCPYSDINMKKEAVLPDRLGGEKQITFVPVHFVQKTKRLCTADEQEEA
TPQDTPMETRAMLSGYEGAGRLRGRPPANPLVKREPREEPATAQGQKLLSLGKRGLPSRL
SQSTKYLRVKEEEEEIDLNSMITEHSVDSLQQALHQSVFLSAMSAHPGRDLPLCWEQHCK
LLPGVAGVQASRVAHWTADEVADFIHSLHGCDEQAKQFKEEQIDGKAFLLLTQRDIVKIM
SVKLGPALKIYNSILMFKHAEDNQSAAGNANT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaccgcagcaagagaaccttattcctcctgtcacaacattgaggggcaaaac
gacagccgtgtggaatcgatcctgtctcaaatgatgcaggcagaggataggaagaaaagg
agtttcagcaagggcgtggcggaggaatattgtctaagagagcgaccaaacgaggacacc
gtaaaaatgaagaacaaagtgacaagcacacaagcagtgaggggtaagaagaaggcatgg
tcgtgggatcagtacctgggagaggagaaggtcatagcagctcccctaagactcttcact
gaggcccagtcgttcccccttagcagaaatggtttcaaggtggggatgaggctggagggg
atcgaccctctacacccctctatgttctgcatcctgtccgtggcagaggtgattggttac
cgattacggctccacatcgacagctactcagaatgctatgacttctgggtaaacgcagac
tctccggatatcaggccagccggatggtgcgagtcgacaggacatcagctccacccacca
aaaggctacaatgaaagcgagtttaactgggagaaataccaagaggcttgcaatgctgaa
gctgcaccaaagaatctgtttaaatcccaaaatggtactacgagcacctctaagtttcag
gtgggcatgaaactggaggcagtggacagaaagaacccatgcttggtttgtgtggcctcg
gtggccgacatcgtggacaatcacttcctggttcactttgacaactgggacgacacctac
gactactggtgtgacgccagcagccctcacatccacccagtgggctggtgccaggaccac
ggacgacctctcactgcacctcagggacaccccaatccagaacatttcctgtgggaggag
tacttacaagacaatggttccacggcagttccaagccaggctttctgtatgagagcccct
cacagtttccaggtgaacatgaagctggaggcggtggacaggaggaaccctatgctggtc
cgcgtggccaccatcgcagacactgaggactacagggtcaagatccgttttgacggctgg
catgagaagtttgacttctgggtggactctgacctgccggaccttcaccctgtgggctgg
tgtgcccggacaggtcatcccctggaaccacccctctcacacgcaggaccttctgacctt
aagagctccgtgacccagggagtgtgccccactccgggctgcaggggcgtgggccacatc
aaaggagccaaatacacaggacaccacagtgccttcggctgtccctactccgacatcaac
atgaagaaggaggccgtgctgcctgaccggctgggcggcgaaaagcagatcacctttgtc
cctgtgcactttgtccagaagaccaagaggctgtgcactgccgacgaacaggaggaagcc
acgccccaggacactcccatggaaaccagggctatgttgtcagggtacgagggggctggt
cgtctgagaggacgacccccagccaaccccctggtaaagagagagcccagagaggaacca
gccacagctcagggacagaagctcctctctctggggaagagaggcctacccagcaggctc
tcccagtcaacaaaatatctgcgagtcaaagaggaggaggaagagattgacctgaatagc
atgatcacagagcacagcgtggacagcctgcagcaggccctccaccagtcggtgttcctg
tcggcaatgtcggcccaccctggccgggacctgcccctatgctgggagcagcactgcaag
ctgctgcctggagtggccggagtacaagccagccgtgtggcccactggaccgcggacgag
gtggctgacttcatccactctcttcacggctgtgatgaacaagccaagcagttcaaagag
gagcaaattgacgggaaagccttcttgctcctgacccagcgtgacatcgtcaagatcatg
agcgtgaaactcggtcctgccctcaagatatacaactccatcctgatgttcaagcacgct
gaggacaaccaatcagccgctggcaacgccaacacatga
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