Salmo salar (Atlantic salmon): 106590346
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Entry
106590346 CDS
T04363
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106590346
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106590346
09142 Cell motility
04820 Cytoskeleton in muscle cells
106590346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
EGF_laminin
Laminin_B
Laminin_N
EGF_LMN_ATRN
Laminin_II
Laminin_I
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106590346
NCBI-ProteinID:
XP_014036743
UniProt:
A0A1S3Q9T2
LinkDB
All DBs
Position
ssa29:complement(21699133..21762277)
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AA seq
3086 aa
AA seq
DB search
MKLFFCAIVLLWASSAECQQRGLFPAILNLASNAEITTNATCGEPEPEMYCKLVEHVPGR
RIRNSQCRTCNAQSQNLKEQHPITNAIDGTNGWWQSPSIKNGRQFHLVTITLDLRQIFQV
AYIIIKAANSPRPGNWVLERSMDGVEYTPWQYYAISDTECLTRYNITPRFGPPTYKRDDE
VICTSYYSRLVPLEHGEIHTSLINGRPSADQLTPELLDFTSARYIRLRLQRIRTLNADLM
TLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAMKLQCVCEHNTCGE
SCNECCPGYHQEPWQPGTLSNGNTCEKCNCHNKSEDCYYNQTMDDHKMSMNSHGHFHGGG
VCINCTQNTAGVNCETCTDGFYRPHEVSPYSENPCVECGCDMRGSLTPACIRDDNHAKLE
KGLNPGQCLCKEGFVGERCERCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGA
NCDLCKQGFYNLEDRNPEGCTECFCFGVSDVCESSPWSLFQTVHSNGWLLPTQSVSIYMA
PLTDDDNNLIVPSITMIQSYRFVSTWAAPEGFLGNRLTSYGGLLNYTVAYDVSVDNVDNS
LPSQFDLIIEGNGRSLRQSPPQQLFLTPLREQLVSVELLPQGFVDLHTGQRVDRDELMTV
LADLAGLRIRGHLNASAEGALRLSTVSLDTADIRSANRVQARDVEQCECPWGYLGTSCEY
CSSGFYRVGGILFGGNCLQCECNDHATECDINGVCLDCTHNTTGPHCNQCLPGYYGDTSE
GTPEDCQRCACPLIVATNNFSPTCLLEGPGQVTCDQCQQGYTGTKCERCANGYHGDPTVA
GKECVLCECNGNVDPWDPGHCDTSSGVCLKCHSHTSGDDCERCEDGYYGDAITAKNCQAC
GCHGNGSYSAMCDLLTGQCTCKPNVVGEKCDQCQVGFHSLLSGQGCRDCNCSQSGSVSTA
CEEEGRCQCIPGVAGDKCDRCYHGYFNYQDSGCTQCECAHTHGNCNATTGKCICPPHTIG
EKCELCEEGHWGHDTVAGCKSCDCSEAGSSATQCDLTNGQCLCRPDFASEKCDQCTMGYR
GYPECTACNCNINGTREEFCDKELGLCSCEAPGNCVCKDNVGGRGCDECKKGSFGLSGSN
PAGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLHVVSQSDPQGSVEGVYYQASDMLL
DTRETENITLPGPYYWRLPKHYQGNKLLSYGGKLSYMVAFYALDGAGLANYEPQVLMRGG
HLGKKVIYIDMPAPDNRVKTRQDIPLTEHKWKYFNSVSEKAVSHSDFLAVLSNIEYITIK
ASYGTGLQQSRISNITMDTALEAEEGSEGLEVACLIETCECPAGYAGLSCQECAPGYYRQ
PVTDLNLRGRRPLIQPCVPCQCNNHSQACDLDTGECLGCQHNTAGEHCNVCGSGYYGNVK
GSVGDCSLCACPLKENSFSPTCAMEGVMGDFRCNACKPGYEGRYCERCSVGYYGNPSGPG
GKCEACQCSTAGSLHLVCDSLKGQCECKAGVRGHLCDQCEARHVLDGDQCVSCDDECTGV
LLYDLDALERSFLSVNLTGVILSPYSTLVSLKNDTQEVKNLMSWERSPAYHLNRAEEDLT
NLTQDIDGLLWKATGLSADGEEVAQSTENSVTQGAKFLEYITTIHTAIQVLAEEAAGLNR
TENVEKDEANSTRLWEQVAAMLETIKLVNLSQANASVSTELSATEALLQRVLKDLLEPQG
AIESQTLNISTTLTEHLQQLEDAHALLMTARENNNHTHTLLGSIHTNLPEYQDLKQNVSR
LNQTAETQLEETQDILVDAVNLAEDMSNITSQLEGAKDQLEQWNPMLRKHVDTLVMELRK
RDALELVYKAEDHARELSKKAQGLQSSLVEVMNTTLNATSAEHGNSNIRANVQHAEEMAN
LANLTATMALNMTVQPEESLTDLGSEAVQCSEKILAESLTLRNSTEGFLANISDVTDRMA
LLKEKLCNTSRLIPEQGALLHSLPNGTSEQVLDAKEQAALANASLQRALERLEELRVRLE
KSSTAVAQAKTSISNTNQLFSDSQSTARTAESKLKEAESRTERLYDRLKPLKTLGENLSR
NLSEIREMINQARKQAASIKVAVLADKNCVRAYKPEVSSSNFNTLTMTVKTSEPDNLLFY
MGSSSSVDFMAVEMQHGKVAYLWDAGSGHAKLEYPDVQINNNKWHRINATRFGRHGTLSV
HQLESEPLPAVKTTSPGSATILEVNKSTLIFVGGLGGQIKSSVVKMTQFKGCMGEASLNE
KNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVMLFKTLSPN
GLLLYLASNGTRDFLSIELVEGQVRLTFELGSGPLTLTSNKAYNTGSWYKITLQRNKRKV
YMAVMAADNSSEKEIMEAESPGTASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGCIK
NMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSVSLDPQGELLASFSTRND
TGIILAGFSKAGTRKSRQARQPFLAVMLISGRLEVHVNMAEGGSIHKVVVKSRSGSFSDG
QEHSVILQRNRKMLVVLVDEDHQEMVRLSSEKASLSLTSLYMGGVPPGEGAGLLRTTSSF
YGCIRNLALDAKLLDLSAAVRYHNVDMDSCLLEERPKRVLLPDDADLEAEPTPDPARTPP
PPPGQLNALTPGTLTCASMDNTSSIPEAQQFGISRHSHMVLSINPNTVRRSFSLELSVRT
YAQSGLIYYMAHANQMDYATLQLLGGHLFFTCDKGSGPATATFPVPVNDGQWHTVKTDFN
KKSVVISVDGQPSTPVPAKGNTLDVENKLYLGGLPQTYNAKKIGNVTHSLAGCIHKVMLN
SVKLDTQSPVSEQSTAHCFAAAQDGTFFNGSGYAALIKNGYKVGSDMEVALEFRSTVPDG
VLLGVSSAKVDAIGLELAHGQAVFHVNNGAGRVSATSRLGWWLCDGRWHTLLAKKTKNAL
SLTVDGVTVLTDNPHPQSTSAETKDPVYVGGFPVGVKQNCLTSRMPFRGCMRNIRLIKGH
MTNILDFSTAFTLQGVSPHSCPSTAT
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcttctgtgcaattgtgctgctatgggcatcctccgcagagtgccagcaa
agaggtctcttccctgccatcctcaacttggccagtaatgcagagatcaccaccaacgcc
acctgtggagagcctgagccagagatgtactgtaagctggtggaacacgtaccaggacga
cgcatccgcaactcgcagtgtcgaacctgtaatgcccagagtcaaaacctcaaagagcaa
catccaatcaccaatgctattgacggcaccaatgggtggtggcagagcccaagcataaaa
aatggccgccagttccacttggtgacgatcactctggatttacgacagattttccaggtg
gcctacatcataatcaaggcagccaactcccctcgtcccggtaactgggtgctggagcgt
tcaatggacggtgtggagtacacaccctggcagtactacgccatcagcgacacagaatgt
ctgacccgctacaacatcaccccccgcttcggaccccccacctacaaacgagacgacgag
gtcatctgtacctcctactactcacgtctcgtacccctggagcacggagagatccacacg
tctttgatcaacgggcggcccagtgctgaccaactgaccccagagctgctagacttcacc
tcagcccgctacatccggctgcgtctgcagaggatccgcacgctcaacgccgacctcatg
accctcagctaccgtgaccctaaggaggtggaccccatcgtcaccagacggtactactat
tccatcaaggacatttcagtgggcgggatgtgcatctgttacggccacgcccagagctgc
ccctgggaccccgttgccatgaagttgcagtgtgtgtgtgagcacaatacgtgtggggag
agctgtaatgagtgttgccccggctaccaccaggagccgtggcaaccgggaaccctctcc
aacggcaacacatgcgagaaatgtaactgccacaacaagtccgaggactgctattacaac
caaactatggacgaccacaagatgagcatgaactcgcatggtcacttccatggcgggggt
gtgtgtatcaattgtacccagaacacggccggtgtcaactgtgagacctgcacagatggc
ttctacagaccccacgaggtgtcgccctacagtgagaacccatgtgtggagtgtggctgt
gacatgagggggtctttgactcctgcctgcatcagagatgacaaccacgccaagctggag
aaaggtctgaacccagggcagtgtctgtgtaaagagggctttgtgggtgagcgctgtgaa
cgctgtgcctttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggaa
ggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggcc
aactgtgacctgtgtaagcagggtttctacaacctggaggaccgtaacccagagggttgc
acagagtgtttctgcttcggtgtgtctgacgtgtgtgagagttcaccatggtctctgttt
cagactgttcactccaatggatggctccttcctacccaaagcgtctccatctacatggcg
cccctgactgatgacgacaacaacctcattgtccccagcatcaccatgatccagtcgtac
cgttttgtgtctacctgggctgctccggagggtttcctggggaacaggctgacatcatac
ggagggcttttaaactacactgtggcctatgatgtttctgtggacaatgtggacaattct
ctgccatcacagtttgatttgattattgaggggaacgggagatccctgcgccagtcgccc
ccccagcagctcttcctgacgcccctgcgggagcagcttgtttccgtggagctcctaccg
cagggcttcgtagacctacacacaggccagagggttgacagggacgaactgatgaccgta
ctggcagacttggccggactgaggatcagaggccacctcaatgccagcgcagagggggca
ctcaggttgagcactgtatctctggacacggcagacatcaggtctgctaaccgagtccag
gcccgggacgtggagcagtgtgagtgcccctggggctacttgggcacatcctgtgagtac
tgttcatctggattctatcgcgtcggcgggatcctgttcggaggtaactgtctccagtgt
gagtgtaatgaccacgctacagaatgtgacatcaacggagtctgtctggactgtacccac
aataccactgggccccactgtaaccaatgccttcccggttactatggcgacacctctgag
ggcaccccggaggactgccagagatgtgcttgcccgctgatagtggcgacgaacaatttc
agccccacctgtctcctggagggccctggacaggtgacatgtgaccagtgtcagcagggc
tacactgggactaagtgtgagaggtgtgctaatggttaccatggcgacccgacggtggca
ggcaaggagtgtgtgctgtgtgagtgtaacggaaacgtggacccctgggacccgggccac
tgtgacaccagcagcggtgtgtgtctgaagtgtcacagccacaccagcggagatgactgt
gagaggtgtgaggacggctactatggtgacgccatcactgccaagaactgccaggcttgc
ggttgccatggaaatgggtcgtactcggccatgtgtgacctgctcactggacagtgtacc
tgcaaacccaacgtagtgggagagaagtgtgaccagtgtcaggtgggcttccacagtctt
ctcagtggacaggggtgcagagactgtaactgtagccaatcaggatctgtgtccacagca
tgtgaggaggaggggcggtgccaatgcatcccaggggtggcgggggacaaatgtgaccgc
tgttaccatggttacttcaactaccaggacagcgggtgtacacagtgtgagtgtgcccac
acccacggaaactgtaacgcgacgacaggcaagtgtatctgtcctccccacaccatagga
gagaagtgtgagttgtgtgaggaaggtcactggggtcacgacactgtggcaggttgtaag
tcatgtgattgcagtgaggcgggcagttctgccacccagtgtgacctcaccaatgggcag
tgcctgtgccgcccggatttcgccagtgagaaatgtgaccagtgcaccatgggctacagg
ggctacccagaatgcacggcgtgcaactgcaacatcaacggcaccagagaggagttctgt
gataaggaactgggcctgtgcagctgtgaggccccagggaactgtgtgtgcaaggacaat
gtgggcggaagaggctgtgatgagtgtaagaagggatccttcggcctatctggttctaac
ccggccggctgcagcccctgtttctgtttcggagtctcctcagactgcgaggagctcggt
gggatggtccgtgtaccgatcacactggggtctgacccagagctgctgcatgtggtcagt
cagagtgacccccagggcagtgtggaaggggtctactaccaggcctcagacatgctgctg
gacaccagggagacagaaaacatcacactgcctggaccctactactggaggcttccaaaa
cactaccagggaaataagttgttgtcgtatggagggaagctgtcctacatggtggcgttc
tatgctctggacggggccggcctggccaactacgagcctcaggtcctgatgagggggggt
catctgggaaagaaggtcatctacatcgatatgcctgcccctgacaacagggtcaaaacc
cgtcaggacatcccgctgaccgagcacaagtggaagtatttcaactctgtgtcagagaaa
gctgtgagtcactctgacttcttggcggtcctgagcaacatcgagtacatcaccatcaag
gcctcgtatggtacagggttgcagcagagcagaatctccaatatcaccatggatacggcc
ctagaggcggaggaggggtcagagggtttggaggtggcatgtctgatagagacctgtgag
tgtccagctggctacgctggactgtcctgccaggagtgtgcccccggctactaccgccaa
ccagtgactgatctgaacctgcgggggaggagacccctgatccagccctgtgtgccctgc
cagtgtaacaaccacagccaagcctgtgacctggacacgggagaatgcctgggctgccag
cacaacacagcaggcgagcactgtaacgtgtgtggctctgggtactatgggaacgtgaaa
ggctccgtcggtgactgctctctgtgtgcctgccccctcaaagagaacagcttcagtcct
acctgtgcaatggagggagtgatgggagacttccgctgtaacgcctgcaagcctggttat
gagggacgctactgtgagaggtgttcagtgggttactatgggaacccgtctggtccagga
gggaagtgtgaggcgtgtcagtgtagtactgcaggttctctccatctagtgtgtgactct
ctgaagggccagtgtgaatgtaaggccggggtcaggggacatttgtgtgaccagtgcgag
gcgagacacgtcctggacggggaccagtgtgtctcatgtgatgatgagtgtacgggggtc
ctcctgtatgacctggatgcattagagcgctccttcctgtctgtcaacctgaccggggtc
atcctgtccccctacagcacactggtcagcctgaagaacgacacgcaagaggtcaagaat
ctgatgtcttgggaaaggagcccagcatatcacctgaacagggcggaggaggacttgaca
aatctcacccaggacattgacggactgctatggaaggctacagggctgtctgctgatgga
gaggaagtggctcagtccacagagaacagcgttacccagggggccaagtttctggagtac
atcaccaccattcacactgccatacaagtcctggcggaggaagctgccggtctgaacagg
acagagaacgtggagaaggacgaggctaacagcacgcgtctatgggagcaggtggcggcc
atgttggaaaccatcaaattagtcaacctatcccaggccaacgccagtgtctctacagaa
ctcagtgctactgaggctctcctccagagggtactgaaggaccttctggagccccagggg
gcgatagagtcccagaccctcaacatctctaccaccctgactgaacacctccaacagcta
gaggatgcccatgccctactgatgactgccagggagaacaacaaccacacacacaccctg
ctggggagcatccacaccaacctgccagagtaccaggatctgaagcagaatgtgagccgg
ctgaaccagacagcagaaacccaactagaggagactcaggacatcctggtcgatgctgtc
aatctagcagaggacatgagcaacatcacctctcagctggagggggccaaggaccagctg
gagcagtggaaccccatgttgaggaagcatgtggacactctggtgatggagctgaggaag
agagatgctctggagctggtctacaaggctgaggaccacgcccgggaactcagcaagaag
gcccagggtctgcagagctctctagtggaggtgatgaataccactctgaacgccaccagc
gcagagcatggcaactctaacatcagagctaacgtccagcatgcagaggagatggctaac
ctagccaacctgactgctactatggccctcaatatgactgtccagccagaggagtctctc
actgatctgggatctgaggctgtgcagtgtagtgagaagattctggctgagagtctaacc
ctgagaaacagcactgagggttttctggctaacatcagtgatgtgacagacagaatggcc
ttgctgaaagagaaactctgtaacaccagccgtctcatcccagagcaaggcgccctgctc
cacagcctgcccaacggcaccagtgagcaggtgctggatgccaaggagcaggctgccttg
gccaacgcttccctacagagggcgctggagcgcctggaggagctccgggtcagactggag
aagtccagcacggctgtggcacaggccaaaaccagcatctccaacaccaaccagctgttc
tccgactcacaatccactgccaggacagctgagtctaagctgaaggaggcagagagtcgt
acagagagactgtatgaccgtctcaaacccctgaagaccctgggggagaatctgagcaga
aacctgtctgagatcagagagatgatcaaccaggctcgcaaacaggctgcctctatcaag
gtggcagtgctggcagacaaaaactgtgtgagggcctacaaacctgaggtatcctccagt
aacttcaacactcttaccatgaccgtcaagaccagcgagcctgacaacctgctcttctac
atgggcagcagctccagcgtggacttcatggcggtggagatgcagcatggcaaggtggca
tacctgtgggacgcgggttcaggccacgccaagctggagtaccccgacgtccagatcaac
aacaacaagtggcaccgcatcaacgccacgcgctttgggaggcacggcacactgtcagtc
caccagctggagtcagaacccctgcccgcggtcaagaccacctcaccaggctccgctacg
atcctggaagtcaacaagtccaccctaatattcgttggtggcctgggaggccagatcaag
tcctctgtggtgaaaatgacccagtttaagggctgtatgggggaggcgtcgctcaacgag
aagaacatcgggctgtggaactacgctgagagggagggccagtgtcgcggctgcttcatg
agtccgcagacagaggagacgtccttccactttgatggcagtggctactcagtggtagag
aagcccctccgctccacctccacctccatcgtcatgctgttcaagaccctctcccccaac
ggcctgctgctctacctggcctccaacggcacgagggacttcctgtccattgagctggtg
gagggccaagtgcgtctgacctttgaactgggctctggccctctgaccctcacctccaac
aaagcctacaacaccggcagctggtacaagatcaccctgcagaggaacaaacgcaaagtt
tatatggcggtgatggcggcagataactcatcagagaaagagatcatggaggcggagtct
cctggaaccgcctccgacctcaaccgctccgacctggacccaatctacatcgggggactg
cccatgtctcgccctatcaggagacaagtagtagcacggtcctatgtgggctgcatcaaa
aacatggagatcgcccgctccaactttgacctgctccgagactcctatggtgtcaagaaa
ggctgtgtgttagagcccatccgcagtgtgtctgtactgagagagggctatgtggagctg
ccgtctgtgtctctcgacccccagggggagctgttggcctccttctctacccgcaatgac
actggcataatcctggcaggcttcagcaaggcaggcacccgcaaaagcagacaggctcgc
cagcccttcctggcagtcatgctgatttcggggcgcttggaggttcacgtcaacatggca
gagggtgggagcatccacaaggttgtggtcaaatcacgctctgggagcttcagtgacgga
caggagcactcggtcatcctgcagaggaacaggaagatgctggttgtactagtggatgag
gaccaccaggagatggtacgtctgtcctcagagaaggcctctctgagcctcacctctctg
tacatgggcggggtcccaccaggagagggcgccgggctgctccgaaccacttcctccttc
tacggctgcatcaggaacctggccctggacgccaagttgttggacctgtcagctgctgtg
aggtaccacaacgtggacatggacagctgtctattggaggagaggcctaaaagggtcctc
ctacctgacgacgctgacctagaggccgagcccactccggaccctgccaggacccctcca
ccaccccccggccagctcaacgcgctcacccccggcacactcacgtgtgcatcgatggac
aacacctcatccatcccagaggcccagcagtttggcatctccagacacagtcacatggtc
ctcagcatcaaccccaacacagtgaggaggagtttctctctggagctgtcggtgcgtacc
tatgcccagagtggtttgatctactacatggcccatgccaaccagatggactacgccact
ctgcagctgctgggaggacatctgttcttcacctgtgacaagggcagcggccctgccacc
gccaccttccctgtgcccgtcaacgatggccagtggcacacagtgaagacagacttcaat
aagaagagtgtggttatcagtgtagatggccagccgtcaactccagtgccggctaaagga
aacactctggatgtggagaacaagctgtatctgggaggactgccccagacctacaacgcc
aagaagataggcaacgtgacccatagcttggcaggctgcatccataaggtgatgctgaac
agtgttaagctggacacccagagtccagtgtcggaacaatccactgcgcactgcttcgcc
gcagcccaggacgggaccttcttcaatgggagcggatacgctgctctgataaagaatggg
tacaaagtgggctcagatatggaggtggctctggagttccgcagcacagtgccagatgga
gtcctcctcggggtcagcagcgccaaggtggacgccatcggactggagctagcccacgga
caggcggtgttccacgtgaacaacggtgccgggcgggtgtcggccacttcgcggctgggc
tggtggctgtgtgacggccgctggcacaccctgctggcaaagaagaccaagaacgctctg
agtctgaccgtggacggagtcacggtgctcaccgacaacccccacccccagtccacctcg
gctgagaccaaggacccggtctacgtgggaggcttccctgtcggcgtgaaacagaactgc
ctgacatccagaatgccgttccgtggttgtatgcgtaacatccgcttgatcaagggtcac
atgaccaacatcctggacttcagtaccgccttcaccctccaaggagtgtcacctcactct
tgccctagcaccgccacataa
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