Salmo salar (Atlantic salmon): 106591161
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Entry
106591161 CDS
T04363
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106591161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106591161
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106591161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
106591161
NCBI-ProteinID:
XP_014037826
UniProt:
A0A1S3QCZ7
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Position
Un
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AA seq
678 aa
AA seq
DB search
MIKTEKVLHLKSSRGRKVRVVREHYLREHVPCYSSLCQAQCANEGKVLSGEVTHYVMPDA
GVARDFMEILEFREIQGIVFTQTACQAVQHSRGRRQYNRLRSLLKDPRHHCILFANEFQE
YSYCPREKGEPQDKWQTRCVYHAAVWYHDHLAGLKPVVMITEDQTAVAEYSSLNCGVYVL
CTQEYLQTFWPELQAALELYCSIAQSLQEKGSEGTEREYTEHLPAEVLEAGIKSGRYIQG
TLNVNKHRAQHEAFVRFEGSSNKSSELNSDVLVCGGKNRNRAVHGDMVAVELLPKGEWRG
RTTALTEGQGEEKGDETQSQPMATGRVVGILQRNWRDYVVTFPPKEETQSQSRNSQRILA
TPWDQRIPKIRISTQQADKLQDHRVIVRLDSWDSTSLYPNGHSVRVLGRAGELETEVQTI
LIENCIHVPPFSEAQLGEMPVSSPESPWSVDPAEVITRRDLRQTHLVFSIDPRGCEDVDD
TLSVCSLPPGPGGQRLELGVHIADVTHFVKEGSLTDLEARASXVREATTYYLANRRYDML
PAVLSADLCSLLGGVDRYAMSVMWDLDAQTMAVNKVWYGRTLIQSSYQLYYELAQALLNG
EEAEVPELAQLPPGERDAKLAQLTQALETLTHVARQLRAQRDRGGALELEGVEVRAQLDE
DRNITALVPRQPLEVHET
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaccgagaaggtgttgcatttgaagagttcccgaggacggaaggtccgcgtg
gttcgggaacattatttgagagaacatgttccctgctacagctctctctgtcaggcacaa
tgcgccaacgaaggcaaggtgctgtctggagaggtaactcactatgtgatgcctgatgca
ggcgtggcgagagactttatggagattctggagtttagagagatccaggggatagtgttc
acacagactgcctgccaggctgtccaacacagcagaggacgcaggcagtacaaccggcta
cgcagcttgctgaaggacccccgtcatcactgtatcctgtttgccaacgagttccaggag
tattcctactgccccagagaaaagggagagccgcaggacaaatggcagaccaggtgtgtg
taccatgctgcggtgtggtaccatgaccacctggcaggtctgaagccagtagtgatgatc
actgaagaccagaccgctgtggcagagtacagcagcctcaactgtggtgtctatgtcctc
tgtacacaggagtacctgcagacgttctggccggagctgcaggctgccctggagctgtac
tgctccatcgctcagtccctgcaggagaaagggagcgaggggacggagagagagtacact
gaacacctgcctgccgaggtcctggaggctggcattaagtctggccgatacatacagggg
actctgaatgtgaacaaacacagggcccagcatgaagcctttgtccgctttgagggctcc
tctaacaagagctcagagctgaacagtgatgtgctggtgtgtggggggaagaatcgtaac
cgggcggtgcacggtgatatggttgccgtggagctgttgccgaagggggagtggaggggg
agaaccacggccctgacggagggacagggggaggagaagggagacgagacacagagccaa
cccatggccacaggtcgtgtggtggggatccttcagaggaactggagggactatgtcgtg
acatttccccccaaggaggagacccaatcacagagcaggaactcccagcgaatcctggcc
acgccctgggaccaacgcatccccaagatccgaatcagcacccaacaggctgacaaacta
caggatcaccgtgtgatagtgcgtctggactcgtgggacagcacctccctctaccctaac
ggacacagtgtcagggtgctgggccgggctggggagctggagactgaggtccaaaccatc
ctcatagagaactgtatccatgtacctcctttctctgaggcgcagcttggtgagatgcct
gtgtcctcccctgaaagcccctggtcagtagaccctgctgaggtgattaccagacgggat
ctgagacaaacccacctggtgttcagcatcgaccctcggggctgtgaggacgtagacgac
accctgtccgtatgcagcctccccccaggcccggggggtcagaggttagagctgggcgtt
cacatcgctgacgtcacacactttgttaaagaggggtcgctgacggacctggaggcccgc
gctagttgagtgagggaggccaccacatactacctggccaaccgcaggtatgacatgctg
cctgctgtcctcagtgctgacctctgctctctgctgggaggagtggacaggtatgccatg
agcgtcatgtgggacctggatgcccagaccatggcggtgaacaaggtgtggtacggtcgt
acactaatccaatcctcctaccagctttactatgaactggcccaggctctgctcaacgga
gaggaggcagaggtcccagaactagcccagctaccccctggggagagggatgccaagctg
gcccagctcacccaggccctggagaccctcacccacgtcgccagacaactgcgtgcccag
agggacaggggaggagcgttggagctggagggggtagaggtgagggcgcagctggatgag
gacaggaacatcacagccctggtgcccagacagccactggaggtccatgagacg
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