Salmo salar (Atlantic salmon): 106592451
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Entry
106592451 CDS
T04363
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagocytosis
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
106592451
09142 Cell motility
04814 Motor proteins
106592451
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106592451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106592451
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106592451
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
106592451
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
106592451
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Dynein_IC2
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_WDR3_1st
WDR55
DNAI3_WD
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
PAC11
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
ASA1
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR41
IBD2
Motif
Other DBs
NCBI-GeneID:
106592451
NCBI-ProteinID:
XP_014039269
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MNSYVLKVMSLELMYGLICVVLAPPAAVFRTLQWDTDPSALQLQADSELGRRMHRLGASK
IVQIDFVPKELVTYTKETQTPSAAHQSEEEEEDEESSEPKASPQTDQLEEEGEAEDSKQT
HARELTEEEREQILHSEDFLVFFERSVSVVERALAEEGDIFFDYSGRDLEDKEGDMQGGS
NLSFNRVFHDDHWSKHRVVTCLDWSPQYPELMVASYNSNEDAPHEPDGIALVWNMKFKKT
TPEYTFHCQSSVMSVGFAQFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHP
VYCVNVVGTQNANNLITVSTDGKMCSWSLDMLSQPQESMELVYNKSKPVAVTGMAFPAGD
VNNYVVGSEEGMVYSASRHGSKAGIAEMFEGHQGPVTGISCHNAVGTVDFSHLFITSSFD
WTVKLWSIKHNKPLYSFEDNADYVYDVSWSPVHPALFASVDGMGRLDLWNLNNDTEVPTA
SVTIEGACALNRVRWASGGREVAVGDSEGRVWIYDVGELAVPHPEDWSHFARTLVEIRAN
RGDGEEEGAVELAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatatgttctaaaagtgatgtcccttgagttgatgtatggactcatttgtgtt
gttttggcgccccctgctgctgtgtttaggaccctgcagtgggacacggacccctctgct
ctccagctgcaggcagactctgagctggggcgcaggatgcacagacttggagcgtcaaaa
atagtacagattgacttcgttcccaaagagcttgtgacctacactaaagagacccagact
ccttcagcagcacatcagtctgaagaagaagaagaggatgaggagagcagtgagcctaaa
gcttcccctcagactgaccagttggaggaggaaggagaggcagaggacagtaaacagacc
catgccagagagctgacggaggaggagagggaacagatcctccactcagaggacttcctg
gtgttctttgagcggtcggtctctgtggtggagcgggcgctggccgaggagggagacatc
ttcttcgactacagcggccgggacctggaggacaaagaaggggacatgcaaggtggatcc
aatctgtctttcaaccgtgtgttccatgacgatcactggtccaaacaccgagtagtcacc
tgcttagactggtccccacagtaccctgaactgatggtggcctcttacaacagcaacgag
gatgctccacacgagcctgatgggatagcgctggtgtggaacatgaagttcaagaagacc
actccagagtatacatttcactgccagtcatcagtgatgtctgtgggctttgctcagttc
catcctaacttggtggtggggggaacgtactctggacagattgtgttgtgggataaccgt
agtcacaggaggacccccgtccagaggacccctctgtctgctgcggcacacactcaccca
gtgtactgtgtgaacgtggtgggtacccagaacgccaacaacctgataacagtgtctact
gatgggaagatgtgctcctggagtctagacatgctctctcagcctcaggagagtatggag
ctggtctacaataagtccaagcccgtagcagtaacaggaatggccttccctgccggagat
gttaacaactacgtggtgggaagcgaggaagggatggtgtactctgcgtcccgccacggc
agtaaagcaggtatagctgagatgtttgaggggcaccagggcccagtgactgggatcagc
tgccataacgctgtgggtactgtcgacttctcacacctcttcatcacgtcctcctttgac
tggacagtaaaactgtggtcaatcaagcacaacaagccactgtactcgtttgaggataat
gcagactatgtctatgatgtcagttggtcccctgtgcatccggctctctttgcctccgtg
gatgggatgggtcgtttggacctgtggaacctcaacaatgacactgaggtgcccacagcg
agtgtgacgatcgagggggcgtgtgctctgaaccgtgtgagatgggcgtcgggaggcaga
gaggttgccgtgggtgactcggaggggcgtgtctggatctacgatgtgggagagctggca
gtgccacaccctgaggactggagccacttcgcccgcaccctagttgagatccgtgccaac
cgcggggacggagaggaagagggggccgtggagctggcagcctga
DBGET
integrated database retrieval system
