Salmo salar (Atlantic salmon): 106593359
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Entry
106593359 CDS
T04363
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106593359
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
LRR_14
Ig_3
LRR_9
ig
V-set
Ig_2
Ig_6
LRRNT
Syndecan
Motif
Other DBs
NCBI-GeneID:
106593359
NCBI-ProteinID:
XP_014040173
UniProt:
A0A1S3QJG4
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Position
Un
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AA seq
621 aa
AA seq
DB search
MLITMISSLQHQTMRDLRLRGARSYPLFVLLLALQILAVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFQDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQISVIGPGSF
AGLANLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPASYRGRYIGELEHSYFQCDVPVIVEP
PADRNVTEGMAAELKCRTSSLTSVSWLTPNGSLVTHGAYKVRLAVLNDGTLNFTTVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETTETVDDSQTPALPPIGWVS
SSTTRGPPVQTRTTERTYTVSVLDLDGEGDRGLEEVMKTTKIIIGCFVAITLMAAVLLVI
FYKMRKQNHQQDPDGPASSMEVITVEEELAGVAAMETHLHLPPLEHYNHYNTYRSTYHHS
HTQEPLLIQASSKDNVQETQI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcacaatgatctcctccctccagcaccagacaatgagagatcttaggctgagg
ggggctcggtcctatcccctcttcgtgctgctgttggccctccagatcctggcggtggcc
ggcctggtgcgtgcccagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccgccggagcctgcgcgatgtccccgacggcatctcaaccaacacacgt
tacctgaacctgcaggacaacctcatccaggtgatcaaggtggacagcttcaagcatcta
cggcacctggaaatcctgcagctgagcaagaaccacatccgcaacatcgagattggcgcc
ttcaatggcctggccagtctcaacaccctggagctgttcgacaaccgtctcaccaccatc
cccaatggggccttcgagtacctctccaagctcaaggagctgtggctaaggaacaacccc
atcgagagcatcccgtcgtacgccttcaaccgggtcccctcgctgcgaagactggacctg
ggagagctcaagcggctctcttacatctcagatggagccttccaggacctcagcaacctg
cgctacctgaacctgggcatgtgcaacctcaaggagatccccaacatcctacccttggtc
aggctggaggagctagagatgtcagggaaccagatctctgtcatagggcctggctctttc
gcagggctggcgaacttgcagaagctgtggatgatgcacgctcagatccagaccatcgag
aggaactccttcgacgatctccagtccctggtggagctcaacctggcccacaacaacctc
accctgctgccccacgacctcttcacccccctgcaccgcctggagagagtccatctgcac
cataacccgtggaactgtaactgtgacatcctgtggcttagctggtggctgaaggagaca
gtgcctgccaacaccagctgctgtgcccgctgccacaccccagccagctacaggggtcgc
tacatcggcgagctagagcacagctacttccagtgcgatgtgcctgtcatcgtggagccg
ccggcggatcgcaacgtcacagagggcatggcggctgagctcaagtgcaggacgagctcg
ttgacctcggtcagctggctcacccccaacgggtctctggtgacccacggggcgtacaag
gtgcgcctggccgtcctcaacgacgggacgttgaacttcaccaccgtcaccatgcaggac
acggggacttacacctgcatggtgagcaacacggcgggcaacatctccgcctcggctgtg
ctcaacgttacctcggtggagaacagcggcgtcacctacttcaccacagtcaccgtggag
accacagagacagtagacgacagccagactcctgctcttccaccgattggctgggtatca
tcttcgaccaccagggggcctccggtccagaccaggaccacagagcggacctacaccgtc
tctgttctggacctggatggggagggggaccgcggcttggaggaggtgatgaagaccacc
aagatcatcatcggctgcttcgtggccatcacgctcatggccgccgtcttgctggtcatt
ttctacaagatgaggaagcagaaccaccagcaggaccccgatggccccgcctcatcaatg
gaggtcatcacagtggaggaggagctcgccggtgttgctgccatggagacccacttacac
ctgcctccattggagcattacaaccattacaacacttacaggagcacctaccaccactcc
cacacacaggaacctttactgattcaagccagctcaaaagacaatgtgcaagagacccaa
atttga
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