Salmo salar (Atlantic salmon): 106593708
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Entry
106593708 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106593708
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106593708
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
U-box type E3
106593708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
zf-C3HC4_3
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-CCHC
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
106593708
NCBI-ProteinID:
XP_014040552
UniProt:
A0A1S3QLB8
LinkDB
All DBs
Position
Un
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AA seq
1639 aa
AA seq
DB search
MCFSVSLLSYSKKAVGPPPAHYTCYRCGKNGHYIKHCPMQMDKSVEAPKPVRTSKGIPQS
FMVKAEPGTKGAMLTSTGEYAIPAIDAEAYALGKKERPPFVPREASSSEDEADPIPDELL
CPICNDLMSDAVVIPCCGNSYCDDCIRTSLLDSEEHTCFTCKQSDVSPDALIANKFLRQA
VNNFKNESGYTKPARNKTLQQSAPPPARPQPFRTLGSRQQDPLLANARQQDPLLANARQQ
DPLLANARQQDPLLANARQQDPLLANARQQDPLLVNTSRPPASLTPPSVTLTQSLPIQTP
PIGPPEVSISPDPTPEPHRAEPRHLANHNEPPPPGEMEAGPYMISEPPIRSADSGPQGYH
MPMIGHPPPIRPSHPSGPPPQPSHSLRGGPRPPWDRPYRPLSDHVPPPRHPPPSAPGPAP
HLYPGPNLYHPPPNPHSIPPQSYPPPYSTGPPPPVNYPPQPLYPHGQMPPGVNAPWVPPP
NTQPHSLGPPPLLSSGPPLSKEDFYRQRRLRQDQVTSKLDEFTKDFAKELMEYRPAPKRR
RRSYSRSRSYSRSPFSRSPYSRSRSPRSRSRSYSYTPSRSRSRSRSYGRSPFSRRNGGRG
GRSRSYGRSPRSRSRSRSYGYRRSGSPRSPPPYRGGGGGGGGGWEGGDGAEGGGGYRPRS
RSPGGYRRSRSPGGVRGHHKPPPREPPPYEHKGGPDLSPGGRERWERDSYRQWEKEYRDW
YNKYYKDYSTQHASVHHRGGRGSRERDRLTPPPRDYSPQGRVRRGERGGPPGPHRTHHAL
SSIPSTSARGDGNKERTQGDTSKERTQGGTKTSEGGTKTLKAKKLKKKKNGEELDSANQS
LDRGDATPVRDEPMDELHTLTPSKAPPTSTKVSTNKAALLSGKTPPTSSSQSEKSRKEKG
GKVKIKTEGKVKGEKVKRKTGGEATVTASKNKESSATKPTKASKVKPDELIKREKGRSTP
TVRGGMVKLPLPRPLPPHPHDLPKHLGDARGGRRDPIHSVGVRPPGRPLQPTPPSPAEKR
RRVEERERGRGMDRGMGGPPAKLRRAEGPYLQRGLPAKPPLLLNLACRETGRGEGLLPIP
GTSQTGRLDRFHPISISIPGPGSSMDLGREGRGDGLLPTPGSSEAGRRESDRGSIWPLMG
LQVKPFPQRRIKLNRDLGRNSSMSRPEERPAPATNITTTTTITSTGERPAAPERGAERDG
GMERVAVMVERRSSGERSEVRSVRSERPSSGERLPERGGGGGRSVSLDRMTIAERSAIVK
KPDVTRDRTESEYTPPTERERPAESSKERERPASAKTDRSSSRERSATREQKGERREKAS
SSGDRPASTGERAAGTQRETVAEDRAAVVKEGSGKTRKISRKSSEPTVHHSSDHSVTSTG
SSRAVEERSEPGQSQGAVSKPRDLQTQRRPSPVQFPSPGRERDRGTGGVLIQPPPRSKWE
REEEEEEEEQHSGSRENGALAVSSSVPRDALRREVSPAPPSGQGREMQGSVSKTANTEGK
RGREEGTRRREEGRGLKKGQVNFRKPAKTESRGVKEEGRGGVGREESRGTGPEPRRQRLC
SDLGRETDEAAFVPDYSEGEGSDGERGSGLSHSPSHNTQSPASQSPGGSPSNHSGSTATD
KKKKKKHKKHKKHKKHKKH
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttctgtgtctctcctcagttactctaagaaggccgtcggaccgcctcctgca
cattacacctgctatcgctgtggcaagaacggacactacatcaaacactgcccaatgcag
atggataagagtgtagaggctcctaagccagtcaggaccagtaaagggatccctcagagc
tttatggtgaaggctgaaccaggaactaaaggagccatgttgaccagcactggagaatac
gctattcctgctatagacgcggaggcctatgctctgggtaagaaggagcgtccccccttt
gttcctcgtgaagcgtcatcgtctgaagatgaggctgatccaatccctgatgagctgctc
tgccccatctgtaacgacctgatgagtgatgctgtggtcataccctgctgtggtaactcc
tactgtgatgactgtatcaggaccagtctgctggactcagaggaacacacctgtttcacc
tgcaaacagtctgacgtctcacctgacgctctcatcgctaacaagttcctacgacaggca
gtgaataactttaagaatgagtctggttacaccaaaccagcacgaaacaaaaccctgcag
cagtctgccccgcccccagcacggcctcagccattcagaaccctcggctcacgccagcag
gaccccctattggccaacgctcgccagcaggaccccctattggccaacgctcgccagcag
gaccccctattggccaacgctcgccagcaggaccccctattggccaacgctcgccagcag
gaccccctattggccaacgctcgccagcaggaccccctattggttaacacctctcgcccc
ccagcctccctcactcctccttctgtcaccctgacacaaagcctgcccattcagactcca
ccgattggaccgcctgaggtgtcaatctctcctgaccccacccctgaaccacaccgggca
gagccacggcacttggccaatcacaacgagccaccgccgccaggtgagatggaggcgggg
ccttacatgatatcagagccaccaatcagatcagccgacagcggacctcagggataccac
atgcctatgattggtcaccctccacccataaggccctcccacccatcaggtccacctcca
cagccctcccattccctcagaggaggacccagaccaccttgggacagaccctacagacct
ctttctgaccacgtccccccccctcgccatccccctccttccgccccgggcccagcccct
cacctctacccgggccctaacctctaccaccctccccccaacccccactccatcccgccc
cagtcctacccccctccctactccaccggaccccctccccctgttaactaccccccccag
cccctctacccacatggccagatgcctccgggggttaatgccccctgggttccccctccc
aacacccagccccactcgctgggccccccgcccctcctatcctccggaccccccctctcc
aaggaggacttctacagacagaggagactccgacaggaccaggtaacgtccaagctggat
gagttcactaaagactttgccaaagagctgatggaatacagacctgctcccaagagacgg
agacgctcctactccaggtctcgttcctacagtcgttctccattcagccgttccccctac
tcccgatcccgttctcctcgctcccgctccaggtcttactcgtacacccccagccgctcc
cgctcacgttccaggtcttatggacgctcccccttctccagacgcaacggaggccgggga
ggacgcagccgctcctacggccgctcgccgcggtcccgctcacgctcccgttcctacggc
taccgtcgctccggctctcctcgctcccctccgccttaccgaggtggtggtggtggtggt
ggggggggctgggaaggaggagacggagctgaaggaggaggggggtatcggcccaggtct
cgctccccggggggctacaggaggagcaggagtccaggaggggttagaggtcaccataag
cccccccctcgagagccgcccccttacgagcataaaggtggacctgacctgtctcccggg
ggcagggagcgctgggagagagacagctacagacagtgggagaaagagtacagggactgg
tacaacaagtactacaaagactacagtacccagcatgcctcagtgcaccaccgcggtggc
cggggcagcagagagagggaccgcctcacccctccacccagagactactccccccagggg
cgggtgaggagaggtgagagagggggacctcccggaccccacagaactcaccacgccttg
tcctctataccctccacctccgccaggggggatggaaataaggagcgcacacagggggac
actagtaaagagcgcacacaggggggaaccaaaacgtcagagggcggaactaaaactctg
aaagcgaagaaactgaagaagaagaagaacggggaggagctggattcagccaaccaatca
ctggacagaggtgatgccacacccgtcagggacgagccaatggatgaactccacaccctg
acccctagcaaagccccacccacctccaccaaggtctcgaccaataaggcagcgctgctg
tctggtaaaacccctcccacctcgtccagccaatcggagaagagcaggaaggagaagggg
ggtaaggtgaaaataaagacggaaggcaaggtgaaaggagagaaggttaagagaaagaca
ggaggagaggcgacggtcacagcctcaaagaacaaggagtcttcagccactaaaccaacc
aaagcatcgaaggtcaaaccagacgagctaatcaagagagagaaggggcggagcacccct
actgttagaggaggtatggttaaactccccctgccccgccccctcccccctcacccccac
gacctccctaaacacctgggcgacgcccgcggaggaaggagagatcccattcacagtgtc
ggggtacgcccccctggtcgccccctccagcctacacctccctccccagcagagaagagg
aggagagtggaggagagggaaagggggagggggatggacagagggatggggggccccccg
gctaagctccgccgtgccgagggtccgtacctccagagaggacttccagccaagcctccc
ctcctcctgaacctggcatgcagagagacgggtagaggagagggtctgctccccatccct
ggtacctcacagacagggaggctagaccgtttccatcccatctccatctccatccctggg
cctggttcctccatggacctggggagagaggggagaggcgacgggctgctgcccacccca
gggagctctgaggcaggcagaagagagagtgacagggggtctatctggcctctcatgggt
ctgcaggtcaaacccttcccccagaggagaatcaaactgaacagagacctggggaggaac
agcagtatgtcccgcccagaggagagaccagctccagctactaatatcaccactactact
actattacctctactggagagagacctgctgctcctgagagaggagcagagagagatgga
gggatggagagggtggcggtgatggtggagcggaggtcgtctggcgagaggtcagaggtc
aggtctgttaggtcagagaggccgtcgtcaggggaacgtttgccggagagaggaggagga
ggaggaaggtcggtctctctagaccgcatgaccatcgcggaacgctcggccatcgttaag
aaacctgatgtcaccagggacagaacagagagcgagtacactccgcccactgagcgagag
agaccagctgagagctccaaggagagagagaggccagcatcagccaagacagacaggtca
tcatccagggagaggtcagccaccagggaacagaaaggagagagaagagagaaggcctcg
tcctccggagacagacctgcctctacaggagagagagcggcagggacccagagagagact
gtagctgaagacagagcagcagtggtgaaggagggttctgggaagaccagaaagatcagc
agaaagagttctgagcccacggtccaccactcatcagaccactctgtcacttcaactggc
agcagcagggctgtagaggagaggtctgagccgggccagagccagggtgctgtgtctaaa
ccccgggacctccagacccagaggagacccagtcccgtccagttccccagcccaggcagg
gagagggaccgtgggaccggaggagtcctcatccagccaccaccccggtccaagtgggag
agagaggaggaggaggaggaagaggagcagcactcagggtccagggagaacggggcgttg
gcggtttcctcctccgtgcccagagacgctctgaggagagaagtctcaccagcaccacct
agtggccaaggcagggagatgcagggtagtgtctctaaaacagccaacacagaggggaag
agagggagggaggaggggactagaaggagggaggaaggcagagggcttaaaaaggggcag
gtgaactttagaaaaccagctaagaccgaatccagaggggtgaaggaggaaggaagagga
ggggtagggagggaggagagtcgagggacggggccagagccaaggcgacagcgtctgtgt
tctgacctgggtagagagacggacgaggcagccttcgtccccgactacagtgaaggggag
gggtcagacggggagagaggcagtggcctgagccatagcccctcccacaacacccagagc
cccgcctcccagagccccggcggctcccctagcaaccacagcggctccaccgcgacggac
aagaagaagaagaagaaacacaagaaacataaaaaacacaagaagcacaagaagcat
DBGET
integrated database retrieval system
