Salmo salar (Atlantic salmon): 106594440 Help Entry 106594440         CDS       T04363                                  Symbol rfc1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism sasa  Salmo salar (Atlantic salmon) Pathway sasa03030   DNA replication sasa03410   Base excision repair sasa03420   Nucleotide excision repair sasa03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sasa00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     106594440 (rfc1)    03410 Base excision repair     106594440 (rfc1)    03420 Nucleotide excision repair     106594440 (rfc1)    03430 Mismatch repair     106594440 (rfc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sasa03032]     106594440 (rfc1)    03400 DNA repair and recombination proteins [BR:sasa03400]     106594440 (rfc1) DNA replication proteins [BR:sasa03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     106594440 (rfc1) DNA repair and recombination proteins [BR:sasa03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      106594440 (rfc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RFC1 AAA_lid_RFC1 BRCT AAA PTCB-BRCT RuvB_N AAA_14 AAA_5 AAA_22 Rad17 AAA_16 AAA_33 AAA_7 AAA_17 AAA_30 nSTAND3 BRCT_2 AAA_18 RNA_helicase NPHP3_N NTPase_1 AAA_19 Motif Other DBs NCBI-GeneID:  106594440 NCBI-ProteinID:  XP_014041288 LinkDB All DBs Position Unknown AA seq 1154 aa AA seqDB search MDIRRFFVSSKPAAQKPSQDGNLNTESPKKKSVSTDEEVKKKQTATKVVKKKKKDSDKKT KKRAVIESDSEEEVVEHKQKVRKQHPPLPPAKKDPVQYVSETDSDSDNFLSLKKSAKPQD NGVTKPGKARTGTKEIYRSPSKPTPAPAKGKGVIKKSPPAPVTPKSAPQHTKRTPTSVLD YFGSGSVQRSGKKLVASTKRKADHDESLTDEVIAQQLQMDEDMELERLVHEDEEFARTLA MLDQEPHAKKARKDSGKDLGSDTSANKSIANSSHSSTTSQSQSNGRDHNQDVIGPSPKKV PPLVKTSSKLAVMKRREVEEEGGGKTNLTIKMPVSPKKEFLTTSSTDRKSKPKTGSVTMV TTRTTLKTSPKKESTSPEDSEKKRGNSSAFRSFLNRDGPRALGSKPIPTGAENCLEGCVF VISGVLESMEREDAKSLIERYGGKVTGNVSKRTTYLVMGRDGGAAKTDKAEGFGTKILDE DGLLELIRCSPGKKSKYLIAAEAENKGFKSRTPDTEALSRTPKQSSKPSPSKPGSASGRG VRVGDSVTPPARGTGSGVKRGLDLGGKSQSSSSSATPSLPSFAGEDFSLLWVDKYRPQNL KAVIGQQGDQSQANKLLRWLKNWHTHHAVGGAKPAGRGFGKFSSTKDNGSSFKAALLSGP PGVGKTTTAALVCQELGYSYVEMNASCTRSKNSLNLIAESLNNSSINNYYTGSSQTVSSK HVLIMDEIDGMAGNEDRGGIQEMIGLIKQSRIPIICMCNDRNHQKIRSLANYCFDLRFQR PRLEQIKGAMMSIAFKEGLKVPPPALNEMILASNQDIRQVLHNLSMWSAKDKVMTYDRVK EDANNARKDMKLGPFDVCRKVFSKGEESGHMTLIDKSDLFFHDYALAPLFIQENYIHVRP AAAGGDLKSHLVLLSKTADCICDGDLVDRQIRSKQAWSLLPTQAIYSSVLPGELMRGYMN SFPSFPSWLGKFSSCNKHSRIIQELASHMSLKTLSSRQAVSLDYLPYLRMSLLCPLQRRG AEGAGQAVQLLDDYHLVREDVDSLMEISLWGGQPDPYAQLDPKVKSAFTRAYNRETHLTP YSLQPIKKGRRGGGVEAELGGEEQAEQPEEEEEEEGVAADAMIKKKAKPSKEPKKEKTTA GDSGKGKGKGKGRK NT seq 3465 nt NT seq  +upstreamnt  +downstreamnt atggacatcagacggttctttgtatcaagcaaacccgcagcgcagaaaccgtctcaggat ggaaacctcaacacagagtccccgaagaagaaatccgtctcaacagacgaagaagtgaag aaaaagcaaactgccaccaaggtggtgaagaagaagaagaaggacagtgataaaaagaca aagaagcgtgctgtcattgagtcagactctgaggaggaggtagtggagcataagcagaag gtccggaaacagcaccctcctcttcctcctgccaagaaagacccggtgcagtatgtctct gagacagattcagacagtgataacttcctgtctctgaagaagtctgcaaagccccaggat aatggagtgaccaaaccagggaaggcccgcaccgggaccaaagagatctacaggtccccc tcgaaacccacccctgcgcccgccaaggggaaaggagtgataaagaagtctcctccagcc cccgtcacccctaaatcagcgccccagcacaccaaacgcacccccacctctgtcctggac tactttggcagtgggagtgtccagcgctcgggcaagaaactggtagcaagtaccaagagg aaagctgaccatgatgagtcgctgactgatgaggtcatcgcccagcagctgcagatggac gaggacatggagttggagaggctggtccacgaggacgaggagtttgccaggacgctggcc atgttggaccaagaaccacacgccaaaaaggctcgtaaggactctggtaaggatctgggg tctgacacgtcagccaacaaaagcatcgctaactcctcccacagcagcactaccagccaa tcacagtccaatgggcgggaccacaaccaggacgtgatcggtccgtcccctaaaaaggtc ccccctcttgttaaaaccagttccaaactggccgtgatgaagagaagggaggtggaagag gaaggaggagggaagacaaatctgactatcaaaatgcccgtctctcccaaaaaggagttc ctaaccacttcaagcacagacaggaagtccaagcccaaaacaggaagtgtaaccatggtg accacacgcacgactcttaaaacctcccccaagaaagagagcaccagtccagaggattca gagaagaagcgagggaactcctcagccttccgtagtttcctgaacagagacggacccaga gccctggggtctaaacccatacccactggagcagagaactgcctggaggggtgtgtgttt gtgatatctggtgtgttggagagtatggaacgtgaggatgctaagtccctgatcgagcgc tacggagggaaggtgaccggcaacgtcagcaagaggacgacatacctggtgatgggcaga gacggaggagcggccaagactgacaaggcggaggggtttggaactaagatcctggatgag gatggtctgttagagctcatcagatgttcaccagggaagaaatccaagtacctgattgct gccgaggccgagaacaagggatttaagagcagaaccccagacaccgaggccttgtctcgc actcccaaacagtcctcaaaacccagcccctccaaacctggctcggcgtcggggcgagga gtcagggtgggggacagcgtgacccccccagcgagaggtacaggttcaggggtcaaaaga gggctggacttggggggtaagagccaatcatcttcctcctctgccactccgtctttgccc tcattcgctggtgaagatttcagtctgctgtgggtggataagtaccgcccccagaatctg aaggctgtgattggtcagcagggagaccagagccaagccaataagttgcttcgctggctg aagaactggcacacccaccatgcagtgggaggggctaaaccagcaggcagagggtttggt aagttcagcagtactaaggataacggctccagcttcaaggcagcgctgctgtctggtcct ccaggggtgggcaagaccaccacagctgctctggtctgtcaggagctgggttatagttat gtagagatgaatgccagctgtacccgcagtaagaacagtctgaatctgatcgctgagtct ctgaacaacagcagcatcaacaactactacacaggttcgtctcagacagtcagcagtaag catgttctcatcatggatgagattgatggcatggcaggaaacgaagaccgcggaggaata caggagatgataggtctgattaaacagtccaggatccccatcatctgtatgtgtaatgat cgtaaccaccagaagatccggtctctggccaactactgctttgacctgcgcttccagaga ccacgactggaacagatcaagggtgccatgatgtccattgctttcaaagagggtctgaaa gtcccgcctcctgccctcaacgagatgatcctggcgtccaatcaggacatccgacaggtc ctccacaacctgagcatgtggtcggctaaggacaaggtcatgacctacgaccgggtcaaa gaggacgccaacaacgcacgcaaggacatgaagctgggtccgtttgacgtgtgtcggaag gtgttctccaagggggaggagtcgggtcacatgacgctgattgacaagtcggacctgttc ttccatgactacgccctcgcccccctcttcatccaggagaactacatacatgttagacct gctgctgctggtggtgatctgaagtcccacctggtcctcctcagtaagacagctgattgt atctgtgatggagacctggtggacagacagatacggtccaaacaggcctggtctctactg cccacacaggcgatctattccagtgtgttaccaggagagttgatgcgtggctatatgaac tctttcccctcgtttccctcctggctgggaaagttctcctcctgcaataaacactctcgg atcattcaggagctggcctctcacatgagcctcaagacattaagtagcagacaggcagtg agcctggactacctcccttacctccgcatgtccctgctgtgtcctcttcagaggcgcggg gcggagggggctggtcaggctgtccagctgttagatgactaccacctggtcagagaggat gtggacagcctcatggagatcagcctctgggggggccagcctgacccttacgctcaacta gaccccaaggtgaagtcagcgttcacgagggcctataaccgggagacccacctgacaccc tactccctccaaccaatcaagaagggccgtcgtggcgggggagtggaggcagaactggga ggagaggagcaagcggaacagcctgaggaagaggaggaggaggaaggtgttgcagctgac gccatgatcaaaaagaaggccaaaccctccaaggagcccaagaaggagaagacaacagcc ggggattctgggaagggaaagggcaaaggcaagggcaggaagtga

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