KEGG   Salmo salar (Atlantic salmon): 106594672
Entry
106594672         CDS       T04363                                 
Name
(RefSeq) nucleoporin seh1-like
  KO
K14299  nucleoporin SEH1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
sasa04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106594672
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    106594672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106594672
   04131 Membrane trafficking [BR:sasa04131]
    106594672
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106594672
Membrane trafficking [BR:sasa04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    106594672
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EIPR1 EIF3I ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 106594672
NCBI-ProteinID: XP_014041543
UniProt: A0A1S3QNA4
LinkDB
Position
Un
AA seq 359 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKTESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLRCSCISWSPSSSRAHAP
MIAVGSDDSNSSYSGKVHIYEYIENTRKYAKAEHLMTVTDPVHDIAFAPNLGRSFHVLAI
ATKDLRIFKLIPMRREVTAGSSCPTKLQVQIVAQFDNHNSQVWRVSWNITSTLLASSGDD
GCVRLWKANYMDNWKCTGILKGDGSPVNGSSGQPGAMNNMVGSTVQTSQNALNGSAAGR
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtttgtggctcgtagcattgcagcagatcacaaagatctaatccacgatgtttcctac
gattttcacggccggagaatggcaacttgttcaagtgaccaaagtgtcaaggtttgggac
aagactgaaagtggggagtggcactgcactgccagctggaagacacacagcgggtcagta
tggagggtgacatgggcccaccctgagtttggacaggtactggcctcttgctcctttgac
cgaacagccgctgtgtgggaggagatagttggggagtctaacgacaaacagagagggcaa
agccactggataaagaggacgactctggtggacagcaggacgtcggtgacggacgtgaag
ttcgctcctaaacacatgggtctgatgctgacaacgtgctcggcggacggggttgtgagg
atctacgaggctccggacgtgatgaacctcagccagtggtccctgcagcacgagatctcc
tgtaaactccgctgctcctgtatctcctggagcccctccagctcccgtgcccacgccccc
atgatagcagtgggctctgatgacagcaactcatcatacagcgggaaagttcacatctat
gaatacattgaaaacacaaggaagtatgctaaggcagaacatctgatgacggttaccgat
ccagtccatgacattgcctttgctcccaacttgggacgctcttttcacgtgctcgccatc
gccaccaaagacctacgcatcttcaagctgataccaatgaggagggaggtcacagcgggg
tcgtcttgtcccactaagctgcaggttcagatcgtggcccagtttgacaaccacaactcc
caggtgtggagagtctcctggaacatcaccagcactttgctggcctcctcaggagacgac
ggctgtgttcgactctggaaagccaactatatggacaactggaagtgtacaggcatcctg
aagggagacggaagtccggttaacgggtcgtcaggacaacccggtgccatgaataacatg
gtggggtcgactgtccagacctcccagaatgcactgaacggctctgccgcaggaaggtag

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