Salmo salar (Atlantic salmon): 106594672
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Entry
106594672 CDS
T04363
Name
(RefSeq) nucleoporin seh1-like
KO
K14299
nucleoporin SEH1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106594672
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
106594672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106594672
04131 Membrane trafficking [BR:
sasa04131
]
106594672
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106594672
Membrane trafficking [BR:
sasa04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
106594672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
106594672
NCBI-ProteinID:
XP_014041543
UniProt:
A0A1S3QNA4
LinkDB
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Position
Un
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AA seq
359 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKTESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLRCSCISWSPSSSRAHAP
MIAVGSDDSNSSYSGKVHIYEYIENTRKYAKAEHLMTVTDPVHDIAFAPNLGRSFHVLAI
ATKDLRIFKLIPMRREVTAGSSCPTKLQVQIVAQFDNHNSQVWRVSWNITSTLLASSGDD
GCVRLWKANYMDNWKCTGILKGDGSPVNGSSGQPGAMNNMVGSTVQTSQNALNGSAAGR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggctcgtagcattgcagcagatcacaaagatctaatccacgatgtttcctac
gattttcacggccggagaatggcaacttgttcaagtgaccaaagtgtcaaggtttgggac
aagactgaaagtggggagtggcactgcactgccagctggaagacacacagcgggtcagta
tggagggtgacatgggcccaccctgagtttggacaggtactggcctcttgctcctttgac
cgaacagccgctgtgtgggaggagatagttggggagtctaacgacaaacagagagggcaa
agccactggataaagaggacgactctggtggacagcaggacgtcggtgacggacgtgaag
ttcgctcctaaacacatgggtctgatgctgacaacgtgctcggcggacggggttgtgagg
atctacgaggctccggacgtgatgaacctcagccagtggtccctgcagcacgagatctcc
tgtaaactccgctgctcctgtatctcctggagcccctccagctcccgtgcccacgccccc
atgatagcagtgggctctgatgacagcaactcatcatacagcgggaaagttcacatctat
gaatacattgaaaacacaaggaagtatgctaaggcagaacatctgatgacggttaccgat
ccagtccatgacattgcctttgctcccaacttgggacgctcttttcacgtgctcgccatc
gccaccaaagacctacgcatcttcaagctgataccaatgaggagggaggtcacagcgggg
tcgtcttgtcccactaagctgcaggttcagatcgtggcccagtttgacaaccacaactcc
caggtgtggagagtctcctggaacatcaccagcactttgctggcctcctcaggagacgac
ggctgtgttcgactctggaaagccaactatatggacaactggaagtgtacaggcatcctg
aagggagacggaagtccggttaacgggtcgtcaggacaacccggtgccatgaataacatg
gtggggtcgactgtccagacctcccagaatgcactgaacggctctgccgcaggaaggtag
DBGET
integrated database retrieval system