Salmo salar (Atlantic salmon): 106594676
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Entry
106594676 CDS
T04363
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106594676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106594676
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106594676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
106594676
NCBI-ProteinID:
XP_014041546
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Position
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AA seq
170 aa
AA seq
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MSAEEAADKTTPADASAGDGGDEEEEWLYGDDDERADEEEAKLTAAVSAPVPATESDEAV
TTGNGVEAQEKEPGDDDDDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGVAPVNLNIKTA
GTRPYGTGNKSKGVDLEAPGNINGVPVVEVDMETFEEKPWRKPGRCSCVF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaagaggcggcagacaaaacaaccccggccgacgcgagtgcgggagatggc
ggagacgaggaagaagagtggctgtacggagatgatgatgagagagctgatgaggaagag
gccaaactaaccgctgctgtcagtgcacctgttcctgctactgaatcagatgaggcagtt
actacaggcaacggagtggaagctcaggagaaggagccaggagatgatgatgatgacagt
gatagcgacagtgacgatgatgacgatgatgttcgcgtcaccatcggagacatcaagacc
ggagccccacagtacacgacgtatggagtggctcctgttaacctgaacataaagacagca
ggaaccagaccctatggaacagggaacaagtcaaagggtgtggatctggaggctccaggc
aacatcaatggagtcccagtagtggaggtggacatggagacattcgaggagaagccgtgg
aggaaaccaggtaggtgttcctgtgtcttctga
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