Salmo salar (Atlantic salmon): 106594862
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Entry
106594862 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106594862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106594862
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106594862
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106594862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106594862
NCBI-ProteinID:
XP_014041723
UniProt:
A0A1S3QRK6
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Position
Un
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AA seq
415 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSSGTMVVVHDGERRVVVFGPQGRRLHGFGRRGRG
HGEVCHPVDVAVTPSGYVVVTDAGDSAVKVFTTRGSFVLAVWDSFQTPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQRPKAVACCRVTGNIALVETLGLTTTQPP
NGPRPTRLTIFNKDFNMLSQIDSFTLSLGASVWPCMSAVAFDRAGDVMVIDSQRGLIWSL
GKLQNGPVLTPLVSEDLVRPVGLVATAQNTLIVLDSGDHAVKMYSVHSDAILVRK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctcctgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcaagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacttcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggtctgggc
tctggagctctgcgacttcgctcagccttcgggggctgggggtccctgatcaaccccacg
ggggtggccgtgttcgggtcctctgggaccatggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggaggctgcacgggttcgggcggaggggtcgcggc
cacggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgccggtgacagtgcagtgaaagtgttcaccaccagggggagttttgttctggcg
gtgtgggactccttccagacgccctggggggtggatgtggacagctgtggacatatcctc
gtcactgacatccaggccggcacgctctcccaggttgtggtggactttgcccgtggcgtg
actctgatgaaccgagcggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgaccgggaacatcgccctggtggagacactggggctcacaaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacatgctctctcag
atagacagctttactctgagcctgggggcctcagtgtggccctgcatgtctgccgtggcc
tttgacagggccggggatgtgatggtgatagactcccagcgtggattgatttggagtttg
ggaaagctccagaacggcccggtcctaacccccctggtcagtgaagacttggttcgcccg
gtggggctggtcgccacagcacagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggatgctattctagtccgaaaatga
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