Salmo salar (Atlantic salmon): 106595404
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Entry
106595404 CDS
T04363
Symbol
arpc1a
Name
(RefSeq) actin related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
sasa04517
IgSF CAM signaling
sasa04530
Tight junction
sasa04810
Regulation of actin cytoskeleton
sasa05100
Bacterial invasion of epithelial cells
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106595404 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106595404 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
106595404 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106595404 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106595404 (arpc1a)
05100 Bacterial invasion of epithelial cells
106595404 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106595404 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106595404 (arpc1a)
Membrane trafficking [BR:
sasa04131
]
Others
Actin-binding proteins
Arp2/3 complex
106595404 (arpc1a)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
106595404 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_Gbeta
EIF3I
Beta-prop_HPS5
Rax2
RMC1_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
106595404
NCBI-ProteinID:
XP_014042252
UniProt:
A0ABM3E879
LinkDB
All DBs
Position
ssa02:complement(71352563..71364219)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYQKSGNQWVKSHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSLKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPS
QLKTEFLPLLSVLFISENSVVAAGHDCCPMLFRCDDGGSLTFVSKLDLPKASITRNISAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEGDQRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcaccagtttctgcttgagcccatcacctgtcacgcctggaaccgggacaga
acccagattgccatcagtcccaacaaccatgaggttcacatctatcagaagagtggtaac
cagtgggtgaagagtcatgagctgaaggagcacaatggacacatcacaggtatcgactgg
gctcctaagtctgaccgtatcgtgacgtgtggggcggatcgtaatgcctatgtctggtct
ctaaaggacggggtctggaagcccactctggtcatcctgaggatcaacagagctgctact
ttcgtcaagtggtctcctctggagaataagtttgctgtgggcagcggagccagactcata
tcagtctgttacttcgagtctgataacgactggtgggtgagtaagcacatcaagaagccg
atccgttccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctctgacttcaaatgcagggtgttctcggcctacatcaaggaagtagaggagaagccg
ggcccgaccccctgggggtccaagatgccgtttggggcggtgctggctgagtttgggggt
gctgggggaggaggatgggtccactctgtgtccttctcctcctctggtaacagactggcc
tgggtctcacacgactccactgttactgtggtggacggcaccaagggatccactccgtct
cagttgaagactgagttcctccctctgctcagtgttctcttcatctctgagaacagcgtg
gtggcagcgggtcatgactgttgccccatgctgttccgttgtgatgacggagggtcccta
acgtttgtctctaagctggaccttcctaaagcttccatcactagaaacatctcagctatg
gaacgtttcagaaacatggacaagagagctaccacagaggaccgcaacacagccctggag
acactgcaccagaactccatcactcaagtctctatctatgagggagaccagagggactgt
cgtaagttctgtaccacgggcatcgatggagccatgaccatctgggacttcaagagtctg
gaggcgtccatccaggggctgaggatcatgtga
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