Salmo salar (Atlantic salmon): 106595500
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Entry
106595500 CDS
T04363
Name
(RefSeq) coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106595500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106595500
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106595500
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106595500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_RFWD3
HEAT_GCN1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
106595500
NCBI-ProteinID:
XP_014042347
LinkDB
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Position
Un
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AA seq
782 aa
AA seq
DB search
LSQVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL
EGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNN
VALGYDEGSIIIKLGREEPAMSMDTSGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAV
KDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAI
RESNSVVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQP
KHIFWSDSGELVCIATEDSFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVK
TGLWVGDCFIYTSSVNRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSY
SLLVSVLEYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRF
ELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATA
SGNAAMVGKLAEGAERDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQ
VSRVVKLWRESLAKVNQKAAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSRPATDY
PLVTPNEDRNILEDATRYEPKGVPLSLATLVPGEDGREEETTLAAGVLASVLTAPVIPSE
PEPETAPEEEEEASPGSSEALKNKALDELEDDLDNMELEDIDTTDVNLDATDINLDDDFL
DD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
ctatcccaggtgtggcagctgggctcctcctctcctaacttcacccttgagggccatgag
aaaggagtcaactgcattgactactacagcggaggggacaagccatacctcatatcaggt
gctgatgaccgtctggtcaagatttgggactaccagaacaagacgtgtgtgcagaccctg
gagggccacgcccagaatgtgtcgtgtgtcagctttcacccagagctgcctatcatcatc
acaggctcagaggacggcactgtgcgtatctggcattcgagtacgtaccgtctggagagc
acgctgaactacggcatggagcgcgtgtggtgtgtgtgtggcctgagaggctccaacaac
gtggcgctgggctacgacgaaggcagcatcatcatcaagctgggccgtgaggagccagcc
atgtccatggacaccagtgggaagatcatctgggccaagcactcggaggtgcagcaggca
aacctgaaggccatgggcgacacggagatcaaggacggagagaggctgccgctggccgtc
aaagacatgggcagctgtgagatctacccccagaccatccagcacaaccccaacggaagg
tttgttgtggtgtgtggagacggagagtacatcatctacactgccatggccctgaggaac
aagagcttcggctcagcgcaggagtttgtatgggcacacgactcctccgagtatgccatc
agggaaagcaacagtgtggtcaaaatcttcaagaacttcaaggagaagaagtctttcaag
ccagactttggtgctgaaggtatctatggaggctttttgctaggcgtcaggtcagtgaac
ggtctggccttctatgactgggaaaacacagagctgatccgccgcatcgagatccagccc
aaacatatcttctggtcagactccggggagttggtgtgtatagccacagaagattccttc
ttcatcctgcgctacctgtcagagaaagtagccgcctcccaagagaacaacgagggagtg
accgaggatggcatcgaagacgcctttgaggtccagggggagatccaggaagtggtgaag
acaggcctgtgggtgggagactgcttcatctacaccagctctgtcaacagactcaactac
tttgtggggggagagattgtcaccatcgctcacctggacaggaccatgtacctgctgggc
tacatccccaaggacgaccgcctgtacctgggcgacaaggagctgaacatcgtcagttac
tccctacttgtgtctgtgctggagtaccagacggctgtgatgcgccgggactttggcatg
gccgacaaagtgctgcccaccatccccaaggagcagaggacacgggtagcacacttcctg
gagaaacagggcttcaagcagcaggctctggccgtgtcatcagactcggagcacaggttt
gagcttgccctgcagctgggggagctgaagatcgcctatcagctggctgtggaggcagag
tcggagcagaagtggaagcagctggcagagctggccatcagtaagtgccagtttagcctg
gcccaggagtgccttcatcacgcccaggactacggcggcctgctgctgctggccaccgcc
tcgggcaacgccgccatggtgggcaagctggccgagggcgccgagcgggacggcaagaac
aacgtggccttcatgacttatttcctgcagggaaaactggaccactgtctggagctgctg
atccggaccaaccggctgcccgaggcggccttcctggcccgcacctacctgcccagccag
gtgtccagagtggtcaagctgtggagggagagcctggccaaggtcaaccagaaggcggcc
gagtcgctggccgaccccaccgagtatgagaacctgttccccggtctgaaggagtcgttt
gtggccgagcagttcctccgggagacctgcctgggcaactcccggccagccaccgactac
cctctggtcacacccaatgaagatcgtaatatactagaggatgccacgcgctacgagccc
aaaggagttcccctctcacttgccacactggtaccgggtgaagatggcagggaggaggag
accacgttggctgctggagtgctggcgtccgtgttgacggcccccgtgatcccctcggag
ccagagcctgagactgcacctgaagaggaggaggaggcgagccccggttcatctgaggca
ctgaagaacaaggccctggacgaacttgaagatgacctggacaacatggagctggaagac
atcgataccacagacgttaacctggatgccacagacattaacctggatgacgacttctta
gacgactga
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