KEGG   Salmo salar (Atlantic salmon): 106595665
Entry
106595665         CDS       T04363                                 
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106595665
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106595665
Membrane trafficking [BR:sasa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    106595665
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   106595665
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 PEP5_VPS11_N HEAT_GCN1
Other DBs
NCBI-GeneID: 106595665
NCBI-ProteinID: XP_014042505
UniProt: A0A1S3QR18
LinkDB
Position
Un
AA seq 572 aa
LSQVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTL
EGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNN
VALGYDEGSIIIKLGREEPAMSMDTSGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAV
KDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAI
RESNSVVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQP
KHIFWSDSGELVCIATEDSFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVK
TGLWVGDCFIYTSSVNRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSY
SLLVSVLEYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRF
ELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATA
SGNAAMVGKLAEGAERDGKNNVAFMTYFLQGK
NT seq 1719 nt   +upstreamnt  +downstreamnt
ctatcccaggtgtggcagctgggctcctcctctcctaacttcacccttgagggccatgag
aaaggagtcaactgcattgactactacagcggaggggacaagccatacctcatatcaggt
gctgatgaccgtctggtcaagatttgggactaccagaacaagacgtgtgtgcagaccctg
gagggccacgcccagaatgtgtcgtgtgtcagctttcacccagagctgcctatcatcatc
acaggctcagaggacggcactgtgcgtatctggcattcgagtacgtaccgtctggagagc
acgctgaactacggcatggagcgcgtgtggtgtgtgtgtggcctgagaggctccaacaac
gtggcgctgggctacgacgaaggcagcatcatcatcaagctgggccgtgaggagccagcc
atgtccatggacaccagtgggaagatcatctgggccaagcactcggaggtgcagcaggca
aacctgaaggccatgggcgacacggagatcaaggacggagagaggctgccgctggccgtc
aaagacatgggcagctgtgagatctacccccagaccatccagcacaaccccaacggaagg
tttgttgtggtgtgtggagacggagagtacatcatctacactgccatggccctgaggaac
aagagcttcggctcagcgcaggagtttgtatgggcacacgactcctccgagtatgccatc
agggaaagcaacagtgtggtcaaaatcttcaagaacttcaaggagaagaagtctttcaag
ccagactttggtgctgaaggtatctatggaggctttttgctaggcgtcaggtcagtgaac
ggtctggccttctatgactgggaaaacacagagctgatccgccgcatcgagatccagccc
aaacatatcttctggtcagactccggggagttggtgtgtatagccacagaagattccttc
ttcatcctgcgctacctgtcagagaaagtagccgcctcccaagagaacaacgagggagtg
accgaggatggcatcgaagacgcctttgaggtccagggggagatccaggaagtggtgaag
acaggcctgtgggtgggagactgcttcatctacaccagctctgtcaacagactcaactac
tttgtggggggagagattgtcaccatcgctcacctggacaggaccatgtacctgctgggc
tacatccccaaggacgaccgcctgtacctgggcgacaaggagctgaacatcgtcagttac
tccctacttgtgtctgtgctggagtaccagacggctgtgatgcgccgggactttggcatg
gccgacaaagtgctgcccaccatccccaaggagcagaggacacgggtagcacacttcctg
gagaaacagggcttcaagcagcaggctctggccgtgtcatcagactcggagcacaggttt
gagcttgccctgcagctgggggagctgaagatcgcctatcagctggctgtggaggcagag
tcggagcagaagtggaagcagctggcagagctggccatcagtaagtgccagtttagcctg
gcccaggagtgccttcatcacgcccaggactacggcggcctgctgctgctggccaccgcc
tcgggcaacgccgccatggtgggcaagctggccgagggcgccgagcgggacggcaagaac
aacgtggcattcatgacctacttcctgcaggggaagtga

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