Salmo salar (Atlantic salmon): 106596334
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Entry
106596334 CDS
T04363
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04060
Cytokine-cytokine receptor interaction
sasa04217
Necroptosis
sasa04620
Toll-like receptor signaling pathway
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
sasa04623
Cytosolic DNA-sensing pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
106596334
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
106596334
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106596334
04621 NOD-like receptor signaling pathway
106596334
04622 RIG-I-like receptor signaling pathway
106596334
04623 Cytosolic DNA-sensing pathway
106596334
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106596334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sasa04052
]
106596334
Cytokines and neuropeptides [BR:
sasa04052
]
Cytokines
Interferons
106596334
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Exo84_C
ATP-synt_E_2
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
106596334
NCBI-ProteinID:
XP_014043114
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Position
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AA seq
175 aa
AA seq
DB search
MYTMQSWTCIFLIICSMQSVYHCCDWIRHHYGHLSSEYLSLLDQMGGDITKQDAPVFFPT
SLYRHIDDAEVEDQVRFLKETIYQITKLFDGNMKSVTWDKKKLDDFLNILERQLENLKSC
VSPAMKPEKRLKRYFKKLNKNVLRKMNYSAQAWELIRKETKRHLQRLDILAAQMY
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaatgcagagttggacgtgtatttttcttattatttgcagtatgcagagcgtg
tatcattgctgtgactggatccgacaccactacggtcacttgagctcagaatacctttcc
ctgctggaccagatgggaggagatatcacaaagcaggatgccccagtctttttcccaaca
tccctttacagacacatagatgatgccgaggttgaggaccaagtcagattcctgaaagag
accatctatcaaatcacaaaactgtttgatgggaatatgaaatctgtcacctgggacaag
aaaaagctggacgatttcctcaacattctagaacgccaattggagaaccttaaatcctgt
gtatcacctgccatgaaacctgagaagagactgaaacgctacttcaagaagttgaataag
aatgttctgagaaaaatgaactacagtgcacaggcatgggagctcatcaggaaagagaca
aaacgtcatctgcaaagattggatatccttgcagcacagatgtactga
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