Salmo salar (Atlantic salmon): 106597194
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Entry
106597194 CDS
T04363
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106597194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106597194
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106597194
mRNA degradation factors
5'-3' decay
Decapping complex
106597194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
106597194
NCBI-ProteinID:
XP_014043891
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Position
Un
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AA seq
478 aa
AA seq
DB search
MERFPHQGLQERPVQDSQGEPRPLSLATLFGVQQPRAELVSPMAGSGSVGPGSQPLGKPG
GVRPAVARSLSYDDPVQAQLHLQAQEGGLISGSSPPQHCPAFQKLMKDAASSSQPQNQLQ
RDGPMEQLQPVSESPENRLHENGAPSVHHHHRTQARQDPIQRLFQNQPTSTTSSMTTSAP
CCSRPPPPPLIPGLQSAHLQPLLVDALGFPGSQHRHLHLPPHQAQPLYFSPTKPPQMLVP
MLPSHPSQSQPPHQPQPGHPQPQSQPCHSFHPFQHPQPLYLHPQPGHPQPGQLTGVVSPH
ELLQRLQLVQQEQSLVPEPTRPSSNLAPRFHEPVPLAPSAPPAMGQHGQQSAHSTARSLD
SLADKNSAGTTAQKFQVISPQRIPATVAPTLLLSPSVFSQAKRPQAKASGDTHCPPGPHP
SSALLAPQAPDDPQPRGLSKSQLQATLLHLIQNDSSFLDTIYESYAQRFSTEATANKF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagagatttccccatcaggggctacaggagaggcctgttcaggacagtcaaggagag
cccaggcctctctctctggcaactctgtttggtgtccagcagcccagagcagagctggtc
tctcccatggctgggtcagggtcagtaggtccagggtcccagcccctggggaagcctgga
ggcgtccgcccggcggtggcccgctccttgtcctacgacgacccagtccaggcccagctc
catctccaggcccaggaagggggtctgatctcaggtagcagccccccgcagcactgccct
gccttccagaagctcatgaaggatgccgcctcctcctcccagcctcagaaccagctccag
cgagacggtcctatggagcagctccaacccgtctccgagtcacccgagaacagactgcat
gagaacggagccccctctgtccatcaccaccatcggacccaggccagacaagaccccatc
cagagactgttccagaaccagcccacttccaccacctcttcaatgacgacctccgctccc
tgttgttctcgtcctcctcctcctcctctcatccctggtctccagtctgctcatcttcag
cctctcctggtggatgctttgggcttccctggttctcaacaccgtcacctccacctcccc
cctcaccaggcccagccgttgtacttcagccccaccaagccgccccagatgctggtcccc
atgttgccctcacacccctcccagtctcaacctccccaccaaccccagcctggtcatcct
caacctcagtcacagccctgtcactctttccaccccttccagcacccccagcccttatac
ctccacccccagccaggtcacccccagccggggcagctaactggtgtcgtctccccccat
gagctgctccagaggctgcagctggttcaacaggagcagagtctggttccggagcccact
aggccttcctctaacctggctccccgcttccacgagcctgtccctctagccccctcagcc
cccccagccatggggcagcacggccagcagtcagctcattctacagccaggtctctggac
agtttggctgacaagaactctgcaggcaccactgctcagaagttccaggtgatctccccc
cagcgtatcccagccacggtggcacctaccctgctcctgtcccccagtgtcttctcccag
gccaagcgcccccaggccaaagcctctggggacacccactgcccccctggccctcatcct
tcctcagccctcctggccccacaggcccctgacgacccccaacccaggggcctctctaag
agccagctccaggccaccctgctgcacctcatacagaacgacagttccttcctggatacc
atctatgagtcctacgcccagcgcttctccacggaagccaccgcaaacaagttctga
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