Salmo salar (Atlantic salmon): 106598029
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Entry
106598029 CDS
T04363
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106598029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106598029
03036 Chromosome and associated proteins [BR:
sasa03036
]
106598029
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106598029
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
106598029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EIPR1
WD40
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
MIOS_WD40
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106598029
NCBI-ProteinID:
XP_014044595
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Position
Un
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AA seq
307 aa
AA seq
DB search
AISDLIIICLQVQIVGLEEESSEFICRNTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYL
RIWRVSETETRLECLLNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQV
LGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTII
YEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWA
PHSSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAIGYNN
CLEILRV
NT seq
925 nt
NT seq
+upstream
nt +downstream
nt
agcgatttctgatttaattattatttgtcttcaggtgcagattgtgggtctggaggagga
gagttcagagttcatctgcaggaacacctttgaccacccctaccccaccaccaagattat
gtggatcccggacagcaagggtgtttacccagacctgcttgccactagcggggactacct
gcgcatctggagggtcagtgaaacagagacgcgtttggaatgcttgctgaataacaacaa
gaactctgacttctgtgccccactcacctcgtttgactggaatgaagtggatcctaatct
actgggcacctccagcattgacaccacctgtactatctgggggttggagactggccaagt
gctgggcagagtcaaccttgtctccggccacgtcaagacccagctcattgctcatgacaa
agaggtgtatgacatcgcgttcagccgcgcaggcggtggtcgggacatgtttgcgtcggt
cggcgcggacggctcagtacgcatgtttgacctgcggcacctggaacacagcaccatcat
ctatgaagatccccagcaccaccccctactgcgcctctgctggaacaaacaggaccccaa
ctacctggccaccatggctatggacggcatggaagttgtgattctggacgtgcgtgttcc
ctgcacgccggtggcccgcctcaacaaccaccgggcctgtgtcaacggcatcgcctgggc
tccccactcctcctgtcacatctgcactgcagccgacgaccaccaggcgctgatatggga
catccagcaaatgcccagggccatcgaggaccctattctggcctacacagctgaggggga
gatcaacaatgtccagtgggcctccacccagcctgactggatcgccatcggctacaacaa
ctgcctagagatcctgcgggtctaa
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