KEGG   Salmo salar (Atlantic salmon): 106598248
Entry
106598248         CDS       T04363                                 
Name
(RefSeq) collagen alpha-5(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106598248
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106598248
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106598248
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106598248
   00536 Glycosaminoglycan binding proteins [BR:sasa00536]
    106598248
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106598248
Glycosaminoglycan binding proteins [BR:sasa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106598248
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106598248
NCBI-ProteinID: XP_014044776
UniProt: A0A1S3QY04
LinkDB
Position
ssa03:8512259..8564366
AA seq 1531 aa
MGQPGSPGCNGTEGERGPNGPAGPCGGDDGLRGLPGAPGPKGESQMLIGIGQPGRPGPRG
RDGDQGVRGVTGPTGQQGDVGPRGAIGLLGLPGAPGLKGQEGRSSSIPGSCGPKGHQGPP
GVPGPKGIKLYAHAPSDLKGETGDLGEKGCKGSPGYAGQVNFKEKGDQGGIGTEGRPGKD
GHQGPAGYEGRKGNTGLAGPDGIPGPWGQKGDQGQDGDPGEVTMIGCAVIGPKGQPGFTG
PLGPTGVTGPPGVTGFQGPPGSPGPNYEGDPDNRGVKGHSGPKGDKGEPGPIIQGEPGRE
GSQGTSGDLGPPGPPGDSDNLKGLIGPPGAKGAKGEQGYSGQYGLKGEKGEVCSLCTGKG
SGEPGPPGSPGQPGLPGFSAGPGPKGEPGLKGPSGSPGQQGLHGPSGVPGPPGPKGNSGS
RNHQGIKGEKGAPGPAGRSGLDGLYGAPGFRGRKGQQGPKGDPYYGPLGLKGDIGVPGPP
GPQGYPGPDGSPGPVGIGPLGPSGPKGNSGVPGLPGTPGYRGQKGEPCSSVSDQGVPGLP
GKVGLPGTRGPPGPRGGAGNPGEKGDRGVFSTLGRRGPTGQKGDKGQPGRPSTSGSGNPG
RPGVMGFPGAPGPKGDAGFEILGPAGLKGFPGGVGAQGPPGDPGVLGRPGSPGPPGLNGS
SGPKGSKGVDGSQGPPGYAVTCCTEAPTGPPGLSGRPGPPGINGEMGSRGDPGAPGFGSS
GPAGDPGPPGASGPGVQGLTGQMGGRGRDGLPGASGPRGDPGLEGRSGPGPDGPPGPEGP
PGPKGSVGPDGEKGHRGVPGSVGDDGPPGPCGPSSNTDIHGPPGDPGKRGLPGFHGAKGH
PGYPGPKGIDGRDGDPGNGSRGCPGEPGADGLCSGGPGPSGLRGNMGLMGLPGPHGIKGG
PGSNGDPGLDGMPGPCGPKGTKGESSCAKPGLPGSPGQKGEPALYNKHDSKGMKGSPGYA
GPPGSQGPSGAKGDPGHHGHHGARGPAGQPGTDGPPGLPVSHGAPGQPGLPGPPGPYGPK
GNQGHDGIPGPAGQKGETLIVRSTPGPRGKNGLPGPKGDVGFPGPTAPGPPGCPGDQGHR
GNEGPQGSRGRPGFGGVCVNGLKGDAGPQGSPGSPGQRGPQGQPGSGGYECKGDKGDLGA
PGGRGMDGPTGDLGPPGLRGPGAIPGPPGPIGSPGHSGTPGVPGEMGDPSYNPGPKGTNG
SKGRPGPPGGPGLDVPMRPKKGDPGPPGYTGNQGPPGPSGPPGQPGLTGPPGPEGQQGHS
PPGLPGFPGRKGDKGSPGLTGPLGYQGFPGQKGPLGPRGCSTAGLADSFMLARHSQTIRV
PDCPQGTTLIYSGYSLLFINGNKRAHGQDLGSMGSCLPRFSTMPFLFCDTDDTCRYAARN
DYSYWLSTEKPMPRSMDLIRGDEISSYISRCSVCEGSSNAMAIHSQTAQLPDCPGDWESL
WTGYSFVMQTGAGAEGSGQPLGSPGSCLEHFRQVPFIECHGRGTCNYFPDSYSFWLALLD
PIHMFSKPVPQTVKGRLLENVISRCRVCRKP
NT seq 4596 nt   +upstreamnt  +downstreamnt
atgggccagccaggttccccaggatgcaatgggacagagggtgagagaggtcctaatggt
ccagctggtccctgtggtggtgatgatggattaagaggtttacctggagcacctggacca
aagggtgaatcccaaatgttaattgggattggacagccagggagacctggaccccgagga
agggacggtgaccagggtgtccgcggtgtaacaggaccgacaggacaacaaggggacgtt
ggaccccgtggtgccattggattgctaggtctacccggggccccagggttaaagggtcaa
gagggacgcagctccagtatccctggctcttgtggtccaaagggacaccaagggccccct
ggagtcccgggacccaaagggatcaagctatatgcccatgctccctccgatttgaagggg
gagacaggggatctgggtgagaagggctgtaagggttcacctggttatgctggccaggtc
aactttaaggaaaaaggggaccaggggggcattggcactgagggaagaccagggaaggat
gggcatcaagggcctgctggatatgaggggagaaaggggaatactggtttagcaggacct
gatggaatacctggaccgtggggacagaagggcgaccagggtcaagacggagaccctggg
gaggtgaccatgattggctgtgccgtaattggccccaaaggacaaccaggatttactggc
cccctggggcccactggggttactggtccccccggtgtcactggtttccaggggcctcct
gggtctccaggtcctaactacgaaggagatcccgacaatcggggagtgaagggccacagt
gggcctaaaggggataaaggagaaccaggacccatcatccagggagagccaggcagggaa
ggctcacaaggaacatctggagaccttggacccccgggaccacctggagactcagataat
ctgaagggccttataggacctccgggggcaaagggagccaagggagaacaagggtacagt
ggccaatatggattgaaaggtgagaaaggagaggtctgtagtttgtgtacgggaaaaggg
tcgggagagccgggacccccaggttcccctggtcagcctggactcccaggctttagtgca
ggaccaggacccaaaggagagccaggactcaaaggaccctcgggatcacctggacaacag
ggtctccatggcccttcaggtgttccaggacccccagggccaaaaggaaattcaggttcc
cgcaaccaccaggggataaagggagagaaaggagccccaggaccagctggtagatcaggg
ctggacggcctatacggggcccctggcttccgtggacgcaagggccaacaaggccctaag
ggtgatccatactatgggccactgggtctgaagggagatattggtgtcccaggccctccc
gggccacagggatacccaggaccagacggttcaccaggtccagtaggcataggaccgctt
ggcccctcaggacctaaaggcaatagtggggtaccaggtctacctggtacacctggttac
cgaggtcagaagggtgagccctgcagcagtgtgtctgaccagggagtcccaggcctaccg
ggaaaggtggggctgccgggcacacggggccccccaggtcctcgtggtggtgctggtaac
ccgggggagaaaggggacaggggtgtattctccaccctgggaagacgaggacccactgga
cagaaaggtgacaaagggcagccgggacgcccaagtacctctggaagtggcaatcctgga
cgacccggcgtaatgggattccctggggctccagggccaaagggtgatgctgggtttgag
atcctaggtccagccggccttaaaggtttcccaggtggtgttggggcccagggccctcct
ggagatccaggagtactgggccgaccagggagtccgggaccacccggcctcaatgggtcc
tcaggccccaaaggaagtaaaggtgtagatggttcccaaggacctcctggttacgcagtt
acttgctgtactgaagccccaaccggaccaccagggctgtcaggcagacctggaccccca
ggtattaatggagagatgggttcgcgcggggaccctggcgccccgggctttggaagttca
ggtccggctggtgaccctgggccccctggggcctccggacccggagtgcagggcctgact
ggacagatgggaggcagagggagagacgggttaccaggtgcatcaggtcctagaggtgac
cctgggctggaaggaagatctggaccgggccctgacggcccacctggacctgaaggacca
cccggtcccaaagggtcggttggccctgatggggagaaaggtcacaggggtgtaccaggc
tctgtgggggacgacgggcccccaggcccttgtggaccatcatccaatacagacatacat
gggcccccaggggaccctgggaaacgtggtctgcctggtttccatggtgctaaaggacac
cctggatatcctggacccaaaggcattgatgggagggatggcgacccaggaaatgggtcg
agaggctgtccaggtgaacctggggctgatggactgtgctcaggaggaccaggcccatct
ggactcagaggaaatatggggctcatgggtctaccaggtccccatggaataaagggaggc
ccgggttccaatggagacccaggactagacggtatgcccggtccatgtgggccaaaagga
actaaaggagagtccagttgtgcaaaaccaggcctcccaggatcacctggacagaagggc
gagccagccttgtataacaaacatgactccaaaggaatgaaaggctctcctggttacgca
ggtcctccaggctcccaaggaccctctggagccaaaggagacccaggacatcatggacat
catggagcccgaggtcctgccggccaaccaggtactgatggccccccaggactccctgtg
tcacacggagctccaggacaaccagggttacctggccctcctggtccctatggtcctaaa
ggtaaccagggtcacgatggcattcctggacctgctggtcagaagggagagacactgatt
gtgagatcaactcctggcccacgtggaaagaatggactgccaggtccaaagggagatgtg
ggtttccctggccccactgctccggggcccccagggtgtccaggagatcagggccaccga
ggcaacgaaggaccccagggttctcgcgggaggccagggtttggtggtgtttgtgtcaac
gggctgaaaggagatgctggtccccagggcagccctggaagccctggacagcgaggtccg
cagggacagccaggttctggaggctatgaatgtaaaggggacaagggagacctgggcgct
ccagggggcagaggcatggacgggcccacaggggacctcggacctccagggctacgggga
ccaggagccatccctggacctccaggaccaatcgggtccccaggtcactctggaacccca
ggagtccccggtgaaatgggtgatcctagttataaccccggcccgaaaggtacaaatgga
tccaaaggccggccaggaccaccaggtggtccgggacttgacgtgccaatgagacccaaa
aaaggggatccgggcccacccggttacaccggcaaccagggacctccaggtcccagtggg
ccgccaggacaaccaggattaacagggcccccaggtcctgagggtcaacagggacacagc
cctccaggcctgcctggcttccccggacgcaagggagacaaaggatcgccaggactgaca
gggccactgggctaccaggggtttccaggtcagaagggtcctcttggcccacggggctgc
agcacggcaggcctggctgacagtttcatgctggcccgacacagccagaccatcagagtg
cctgactgcccccaaggcaccaccctcatctactctggatactctctgctcttcatcaat
ggcaacaaaagggctcacggacaagacctgggctccatgggcagctgcctgcctcgtttc
tccaccatgcccttcctgttctgtgacacggacgacacttgtcgctacgccgcacgcaac
gactactcctattggctgtccacagagaagcccatgccacgcagcatggacctgatcaga
ggagacgagatcagcagctacatcagcaggtgttcagtgtgtgagggcagctccaatgcc
atggccatccacagccagactgcccagctcccagactgtcctggtgactgggaatccctg
tggactggatactcctttgtcatgcaaacgggtgcgggtgctgaggggtcgggccagccc
ctgggctccccaggctcgtgtctagaacacttccgccaggtccccttcatcgagtgtcac
ggccgaggaacctgtaactacttccctgactcctacagcttctggctggccttgctcgac
cccatccacatgttcagtaagcctgtgccccagacggtgaagggacgtcttctagagaat
gtcatcagtcgctgccgcgtatgcaggaaaccatga

DBGET integrated database retrieval system