Salmo salar (Atlantic salmon): 106598756
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Entry
106598756 CDS
T04363
Symbol
rpap2
Name
(RefSeq) RNA polymerase II associated protein 2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106598756 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106598756 (rpap2)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106598756 (rpap2)
Protein phosphatases and associated proteins [BR:
sasa01009
]
HAD phosphatases
Fcp/Scp phosphatases
106598756 (rpap2)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106598756 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
106598756
NCBI-ProteinID:
XP_014045245
UniProt:
A0A1S3QYR7
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All DBs
Position
ssa03:12306240..12318927
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AA seq
548 aa
AA seq
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MKTEISFLQLQLCLHIDGKRVKAQTSAEEARRREAERETLREKLDLEKRPLQAVECLLED
SVVEDFLVDCESLITSANYKDXVEERSIVKLCGYPVCSNKLGKVPTQQFKISTNTNKVNA
ITERMFCYKASKSIELHISKSPLWLRQHESPPDVNLMKKGDCGSTGEEVRLTEAFQRGRC
EEPSPVLCGPREPQTIPYSRSQRHSTALCFQRGLPATGTQGALRQSAQAHRRRGGNEERE
RRSGGKDTSAQLQPTWDSTPAQPTQPGFRIIQLLEGLRRTFDEWWAEETMKFLYGPDHFN
KTTVETKKKKKEEEEEEHDEDILEDIVQGVGDGGDSGSPGGPXSPFAPSPDYDTIRRDTE
ELGLRVREFYKGDEAHQVSGKRALRLRGELGIKCSVVTVSLQMGALCICIGDVKRDDDDG
LVFEVGFYHEDVFFNVSSHFFPSLLFSSPFPSTLFLLSRSFSCFHALSLTLSPPTPPRPG
PGWLVDSHAQHLIQKRITVEKLTRGLRNIVGPLRRTMTDISRDLNNLVTTFRLSEVFPVS
CHFRTYRA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggagatatcattcttgcagctacagttgtgtttacatatagatgggaagcgt
gtcaaagcacagacctctgcagaggaagcaagaaggagagaggcagagagggagaccctg
agagagaaactggacctggagaagagacctctgcaggcggtggagtgtctcttggaggat
agcgtagtggaggacttcctggttgactgtgaaagcttgatcacttctgccaattacaaa
gacnnagttgaggagagatctattgtgaagctgtgtggctatcctgtctgttcaaataaa
ctgggcaaggtccccactcaacagttcaaaatttccaccaacaccaataaagtcaatgcc
attacagaacgcatgttctgctacaaagcctctaagtccattgagctgcatatatcaaag
agccctctatggttgaggcagcacgagagccccccagatgtaaacttaatgaagaaagga
gattgcggtagcactggagaggaagtgaggctgactgaggcgtttcagagaggacgatgt
gaagaaccttcccctgtactctgtggccccagagaaccccagacgatcccgtacagccgg
tcacagcgacacagtacagcactttgtttccagcgtggtctcccagcaacagggacccag
ggtgcgctgaggcagtctgcccaagcacaccgacgaaggggagggaacgaggagagggag
agaaggtcgggagggaaggacacaagtgcacaactgcagccaacgtgggactcaacccca
gcccagcccacccagccgggcttcaggatcatccagcttctagaaggcctaaggaggacc
ttcgacgaatggtgggctgaggagactatgaagttcctatatggcccagaccactttaat
aaaacaacagtagaaacgaagaagaagaagaaggaggaggaagaagaggagcatgatgaa
gatatcctggaggatattgtacaaggggttggggatggaggggacagcgggtccccaggg
ggtccatgaagtccctttgctccatccccagactacgacacaatacgcagggatacagag
gagctggggctgagggtcagggagttctacaaaggggatgaagcccaccaagtgtcaggg
aaacgggccctgagactcagaggtgagttggggataaaatgtagtgtagtaactgtcagt
ctccagatgggggcactatgtatatgcattggagatgtaaagcgtgatgatgatgatggt
cttgtttttgaggttggcttttaccatgaagatgttttttttaatgtctcatctcacttc
tttccctcactcttattctcctctcctttcccatctacgctctttctcctttcacgctct
ttctcctgctttcatgctctttctctcacactctctccacccacccccccaagaccagga
ccagggtggttggttgattcccatgcccagcacctcatacagaaacgcataacggttgag
aagctcactagaggcctgagaaacatcgtgggccccctgcgtcgcaccatgactgacatc
tccagggacctcaacaacctggtcacgaccttcaggttatcagaggtgttcccggtcagc
tgtcacttcaggacctacagagcctag
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