Salmo salar (Atlantic salmon): 106598809
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Entry
106598809 CDS
T04363
Name
(RefSeq) homeobox protein SIX4-like
KO
K15615
homeobox protein SIX4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106598809
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
106598809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
106598809
NCBI-ProteinID:
XP_014045298
UniProt:
A0A1S3QYW5
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Position
ssa01:complement(27140707..27149517)
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AA seq
682 aa
AA seq
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MSSSSGEVTISNDIQKENVKTDRRECIKLLALDTAELSMERTTSNTDAVHSELLVSATSS
LAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAFHQARYQEL
YSILENHSFSPSNHSSLQDLWYKARYTEAEKARGRPLGAVDKYRLRRKYPLPRTIWDGEE
TVYCFKERSRNALKDLYKQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSEAQ
SKSESDGNHSTEDESSKGQEELSPLPLSNSSDGAMTHGPLPLQTGSLDSGLVIKQIGDIK
MPPGSSSGVLFNGNLVTSNPSTVFHNGGSSYLQAPSNILFNGLNLGVQPLAFNPQRLSGG
VLMGGSGVDMQMQAGQEKGLGSSSVDYASYSGCVNGAEVKLEGVYSMAAQNAGSSVLTFS
SSSGALQLGGYSQVHVHSGISDGNGASLLNSNVGLPPLQLPSGSSSSALSQGTIQVNNVA
VSSSSEDSYHHQHHQDKLAMAPMHPSTVLYSMGNAGQTSIKKEPLEGGGGGGVYSYHHGL
HLDPSGQLSYSSAPLNSEEVPSSQGPTPSSDITMDSSSSLEPEVYTTLTVSTPLMAQTDP
NVHHLQSGEYLRGHNPQPVPSSHILGPGMNNNYMSVSESKVDASGDGVNEMVRVMCEEME
PGEEKELAKLQTVQMDEDMADL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttcaggagaagtcacaatttcaaatgacattcagaaggaaaatgtgaag
acggacaggcgagagtgtatcaagcttctggcgctcgataccgcggagttgtctatggag
cgcacaacttcgaacactgatgcggtccacagtgaacttctggtgagcgcgacttcttcc
ctggcattctccccggagcaagtggcgtgcgtctgcgaggctctgcagcagggaggcaat
gtggaccggctggccaggtttttatggtccttgccacagagtgacctgctacgcggcaac
gaaagcatcctgaaagctcaagctcttgtcgcttttcatcaggctcggtaccaggagctc
tacagtattttggagaaccacagcttcagtccgtccaaccactcctcgctgcaagacctc
tggtacaaggcacggtacaccgaggcagagaaagcgcgtgggagacccctgggcgccgtg
gataaatatcgcctgcggagaaagtacccactcccccggactatctgggacggggaagag
acagtatactgcttcaaagagaggtcccgcaacgcgctgaaggatctctacaagcagaat
agatacccctctccagccgagaaaagaaacctcgctaaaatcacgggactctctttgacg
caggtcagcaactggttcaaaaacaggagacagagggacagaaacccatccgaagcacaa
tcaaaaagtgagtctgatggcaaccacagcacagaggatgagtctagtaaaggacaggaa
gagctctctccactccccctctccaattcatctgacggggcgatgacccatgggcccctc
cccctgcagacagggtctctggacagtgggttggtaatcaaacagattggggacatcaag
atgccccctggatccagcagtggggttctctttaatgggaacctagtgaccagtaacccc
tccactgtcttccataacggtggctcgtcttacctccaggcccccagcaacatcctgttc
aacgggctcaacctgggtgtccagcccctggccttcaacccccagcggctctctgggggg
gtcctaatggggggctctggtgtggacatgcagatgcaggcaggccaggagaaggggctg
ggcagctccagtgtggactacgcctcctactccggctgtgtgaacggggcagaggtgaaa
ctggagggggtttacagcatggcagctcaaaatgccggctcgtccgtcctcacgttcagt
tcgtcctcaggggcgctccagctgggcggttacagtcaggtccatgtgcacagcggcata
tctgacggcaacggggcatctttgctcaacagcaatgtaggtcttcctcctctgcagctc
ccctctggctcctcctcctcagcactctcacaaggtacaatccaagtgaacaatgtagca
gtcagttcttccagtgaggactcctaccaccaccagcaccatcaggacaagctggccatg
gcccccatgcaccccagcacggtgctgtacagcatgggcaacgctggacagacctccatc
aagaaggagcccctggagggaggcgggggtggtggggtgtactcttaccaccatggcctt
cacctggaccccagtgggcagctcagttactcctcagcccccctaaactcagaggaggtc
ccttctagccagggccccaccccctcctctgacataaccatggacagctcctccagtcta
gagcctgaggtctacaccaccctcaccgtcagcacccctctgatggcccaaacagacccg
aacgtccaccacctccagtctggggagtacctcaggggccacaacccacagcctgtcccc
tcctcacacatcctgggccctggcatgaacaacaactacatgtctgtgtcagagagtaag
gtggacgctagtggcgatggggtgaatgagatggtacgggtcatgtgtgaggagatggag
ccgggagaggagaaggagctggccaaattacagacagtgcagatggacgaggatatggct
gacctttaa
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