Salmo salar (Atlantic salmon): 106598900
Help
Entry
106598900 CDS
T04363
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106598900
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106598900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106598900
NCBI-ProteinID:
XP_014045394
UniProt:
A0A1S3R101
LinkDB
All DBs
Position
ssa03:12124160..12126846
Genome browser
AA seq
244 aa
AA seq
DB search
MLMRISPCAIEMAKPLDHIKRPMNAFMVWSRGQRRKMSLENPKMHNSEISKRLGAEWKLL
SESEKRPYIDEAKRLRAQHMKDHPNYKYRPRRKPKSLLKKDRFLFPFPFLGDAEHLKGFS
TESILASAEKARALLPPTSSPYSLLDPGQFSTGAVQRISEIPHALAANGLSYAPSLGYQT
GAFGSLGCPSQHTHTHPSPTNPGYALPCNCGTWSATGLQPQVAYILFPGMAGIDPYSCSP
HSSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcgcatttcaccgtgcgctattgagatggcaaaacctttggatcacataaag
aggcccatgaacgctttcatggtgtggtctcgcggtcagagacgaaagatgtcactggag
aatcccaaaatgcacaattctgaaatcagtaaaagacttggcgcggaatggaagttgctt
tccgaatcagagaagcgaccatacattgatgaagccaagagattgcgcgcgcaacacatg
aaagatcaccccaactacaagtacagacctcggcgcaaacccaagagcttgctaaagaag
gaccggttccttttcccctttcccttcctcggggacgcagaacatttgaaaggattttcc
accgagtccattttggcttccgctgagaaagctagagcccttttgccgccgacgtcgtca
ccatactcgctccttgacccaggtcaattcagcaccggtgctgtccagaggatctcagaa
attccccacgcgctggctgccaacggcttgtcctatgcgccctctttgggataccagact
ggcgcgtttggaagtttgggatgccccagccagcacactcatactcacccgtcccccacg
aacccggggtacgccttgccctgtaactgtggcacttggtcggcgacgggtttacagcct
caggttgcatacatcctttttccaggtatggccggcatagacccgtactcctgttcacca
cattcaagtgtgtga
DBGET
integrated database retrieval system
