Salmo salar (Atlantic salmon): 106599327
Help
Entry
106599327 CDS
T04363
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106599327
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106599327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
106599327
NCBI-ProteinID:
XP_014045972
UniProt:
A0A1S3R0T4
LinkDB
All DBs
Position
ssa03:complement(24873308..24885382)
Genome browser
AA seq
1160 aa
AA seq
DB search
MQDKTYQSVMYGDDATQISEQIFEWALQGDSAALEKHSAHLGVRDHANASPLHYAASHGH
ISTIQLIVQLTGPDELSASDEEGNTSLHWAVQRTQRESCACLLDLGANPNILNLSLMSPL
HMAVSLGHNTLIELLLSHSNTDVNLEGDLGNTPVMLACCVDNHEALHLLFKYGARLCQQN
KLGHYPIHAAAFAGAKKSMQVVLQKGEEIGYSIETHINYVDKSFSTPLHLAVRGGNLEVI
KLCIEQGAKIDQQQCDKSTALHFACTQGATEAVKLMLSAHDRVCDVINLTDGACQTPLHK
TTIFDHAELAEYLISKGGDINAIDCKGHTPLLLATSCSAWKTVSLLLTHGANLKIKDKHG
CNFLHLAILQPKGLTNLPPEFVKCSSVRELLDAEDNEGCTPMHYACRLGIPESVKNMLRL
NVSLDQKSKQKKSALHFAAEYGRINTCHRLLESMTNTRLLNEGDERGMTPLHLASRGGHV
IVVDLLLRKGTLFHSDYKGWTCLHHAAAEGYTQTMIILLASNIKLLDKTDEDRNTALHLA
AREGHAAAVTLLLDRGAQITLNKSDASFLHEAVLNGRKEAAIAVIHNERCAEAMLLFEVK
STKRCVVMDMIEFLPESFKHLLDTCVKESDDDINSNNYSIEYTFRWLQAPMHVIKLAKAD
KSVDFQPLTALNYMVKFNRIELLTHPVCKKYLEMKWNAYGMKVHLLNLAIYSLGLGPLTH
IIHTLKPILNTNVTNTTSPPSSSSSSSSSSSVSMVTTSLDEQCFIITTCMFLILAMSLYA
VGKELVQIVQQGSKYFYDVTNALDWGAAISSLLFVIPLLMDLKDTWHWEAGVVAVLLSWI
NFLLYFQRFERVGIYVVMFLEIAKTLISIIVLFFFLLLAFALAFYALMLDHVCLQDHIDT
NVMIEHCIVSVKICLKWQLTCICTCITHSYNYFIHCCSQKHFENRASIPLVIMQTFVMMV
GELNYQENVLKPFLGGILPFPYLTYCIFVMFTFAVPILLINLMIGLAVGDIAEVQANAEL
KQIGMQIELHTSLEEKMPYWLMKRIDRTSLTEYPNRACDGKREMLFSMLGMAHERTTLNL
TSHPPTHMEQEISKQKYRLKEMSNIIEKQHNLLKLIVQKMEISSEAEEHDGPQLFQGYRD
KPLPCQSKWNPLLRALAARK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaagacgtatcagtctgtgatgtacggagatgatgctacacagatttctgag
caaatttttgagtgggctctacaaggtgactcggcagcgttggaaaagcactcagcccac
ctgggtgtccgtgaccatgccaatgctagccctctgcactatgccgcatcacacgggcac
attagcaccatacagctcattgtgcagttgactggtccagatgaactgagtgccagtgac
gaggagggcaacacgtcattacactgggctgtgcagaggacccagagagagagctgtgct
tgccttctggacctgggagccaacccaaacatcctcaacctcagcctcatgtctccccta
cacatggctgtcagcctcggacacaacactctcatcgagcttttactgtctcacagcaac
acagatgtcaacctggagggagacctggggaacacacctgtaatgttggcctgctgtgtt
gataaccatgaagctctccatctactttttaaatacggagccagactatgtcaacagaac
aagctggggcattatcccattcacgcagcagcctttgcaggggccaaaaaatcaatgcag
gtggttcttcagaaaggtgaggaaataggttactcaattgaaacgcacatcaactatgtg
gacaaatccttcagtactcctcttcatctggccgtccgcggaggcaacctcgaggtgatc
aaactctgcatagaacagggagctaaaatagaccaacaacagtgtgacaaatccacagcc
ctccactttgcctgcacccagggagctaccgaggccgtcaaactcatgctatcggcacat
gatagagtctgtgatgtcatcaatctcacagatggcgcttgccaaaccccactgcataag
acaacaatatttgaccatgctgaattggctgaatacctcatttcaaagggtggagacatt
aatgccattgactgtaagggtcataccccactgcttttggcaacaagttgtagcgcatgg
aaaacagtgagccttcttctcacacatggggctaatttgaaaatcaaagacaaacatggc
tgcaatttccttcaccttgccatcttgcagcctaaaggtctgacaaaccttcctccagaa
ttcgtaaagtgcagcagtgtgagagagctcctggatgcagaggacaatgagggttgtact
cccatgcactatgcctgcagactgggcattccagagtcagtgaagaacatgctcagactg
aacgtctcactggaccagaagtctaagcagaagaaatctgcactgcatttcgcagccgag
tatgggagaataaacacctgccacagactcctggagagcatgaccaacaccagactgctg
aatgagggagatgagaggggaatgacccccctccacctggcgtcccgtggcggccatgtt
atagtggtggacctgctgctgcggaaaggaacgctgttccacagtgattataaaggttgg
acatgtctacatcatgctgcagcagagggatatacccagaccatgatcatactcctggcc
tcaaatatcaaactgctggacaaaacagatgaagacaggaacacagcgttacatctggct
gccagagagggccatgcggctgcagtgacactgctcctggacagaggggcccagataacg
ctcaacaagagtgatgcctccttcctccacgaagctgttctcaacggcaggaaagaagca
gccatcgctgtcatccacaatgagagatgtgctgaggctatgctattgttcgaagtgaag
tcaactaagcgatgcgttgtcatggacatgatagagttcctgccagagtcattcaagcat
cttttggacacttgtgtaaaggagtcagatgatgacattaatagtaacaactactctatc
gagtacacttttagatggctacaagctcccatgcatgtcattaagcttgcaaaagcagac
aaaagcgtcgacttccagcctctcactgctctgaactacatggtgaaatttaaccgcatt
gagcttttgacccatcctgtctgcaagaagtatctggaaatgaaatggaatgcctatggt
atgaaagtgcacctgctaaatctggccatctactcacttggtctggggcctctgacacac
atcattcatactctgaagcctatcctcaacaccaatgtcaccaataccacgtcaccacca
tcatcatcatcatcatcatcatcatcatcatccgtcagcatggtgaccacatcccttgac
gagcaatgcttcataatcaccacatgcatgttcctgattcttgccatgagtctgtacgca
gttggcaaggagcttgtgcagatagttcagcagggttcaaagtacttctatgatgtgacc
aatgcattggactggggtgctgccatcagttctctgttgtttgtgatccctttactgatg
gacctgaaggacacatggcattgggaggctggggtagtggcagttcttctatcctggatc
aactttctcctctatttccaacggtttgaacgtgttgggatctacgtggtgatgttttta
gagattgcaaaaactcttataagcatcattgtgctcttcttcttcctgctgctggccttt
gccttggcgttctatgccctgatgctagatcatgtatgtttacaggaccatatagataca
aatgtgatgattgaacattgtattgtgtctgtgaaaatctgtttaaaatggcagctaact
tgtatctgtacttgtataacgcattcttacaattactttatacattgttgttcccagaaa
cattttgaaaatagagctagcataccgctagtaatcatgcaaacatttgtcatgatggtt
ggagaactcaactaccaagaaaatgtcctgaagccatttctgggagggattctgccgttc
ccatatttgacctactgcatttttgttatgttcacctttgctgtgcccattctcctcatt
aacctaatgattggcttggctgttggtgacatagcagaggtacaggcaaatgctgagctg
aagcaaattggaatgcagattgagcttcacactagtctggaagagaagatgccgtactgg
ttaatgaagaggattgatcggacctcgctcactgagtaccctaacagagcctgtgacgga
aagagagaaatgttattttcaatgctgggtatggcgcatgagagaaccactctcaacctc
acctcccatccacctacacatatggaacaggaaatcagtaaacagaagtacaggttgaag
gaaatgtctaatattattgagaagcagcacaaccttctgaagctgatcgttcagaagatg
gagatcagttcagaggcagaagagcacgacggtcctcagctgttccagggctacagggac
aagcccctcccctgtcagagcaaatggaaccctctgctgagggcactggcagccaggaag
taa
DBGET
integrated database retrieval system
