Salmo salar (Atlantic salmon): 106599401
Help
Entry
106599401 CDS
T04363
Symbol
tnn
Name
(RefSeq) tenascin N
KO
K06252
tenascin
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106599401 (tnn)
04518 Integrin signaling
106599401 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106599401 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106599401 (tnn)
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106599401 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
Fn3_PBP1
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_2
EGF_Tenascin
EGF_PEAR1L
DUF7949
hEGF
Motif
Other DBs
NCBI-GeneID:
106599401
NCBI-ProteinID:
XP_014046081
LinkDB
All DBs
Position
ssa03:complement(22331454..22370426)
Genome browser
AA seq
1384 aa
AA seq
DB search
MTTRLHWLSRALCLIGILCTVTTTYVTEDSPAPVEKGVTFSHIYKIDLAKSPDCKLALQT
MPHLQDQGLGLQELEGGPTLEGDKDIVFRHQINLKTPKCDCDESEGFKSLLYRVNGLEEE
VEHLKSQCSQGCCGGKGGGAGGVDTSCSGHGTYQHDTCSCQCNPGWEGPDCSISTCPDEC
NDHGRCVDGKCVCLAGYMGSDCSQLMCPGNCNDKGYCMDGKCVCFSHFTGEDCSVQKCSP
DCVHGTCVNGMCICDEGFFGDDCSAVFGPNGLHLVRVTDVSLLVEWQAVRAAEYYVLTWH
PEGNDAELERVTVPNTETSYLITGLRPGVTYIVQVYAVIKEIQSEGDRIEATTVVSGIDG
IRVLGQTEDSIQVDWQNPAAPLDHFRLTHANPDGQEEEQIVPMSAEARTTNTIVGLQPGT
EYLITVQGIKGTIEGKASFVTGVTDLDTPTNLLTKEVTEDTATVEWQKVQAEIDGYVISY
SSADGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTEAETALDAPANL
LTREVTEDTTTVTWEKVQAEIDGYVISYSSADGSSGEIPVGADSSSYRLTGLRPGVIYTV
YIWAVKGSRVSRKSSTPAETDLDAPTNLLTREVTEDTADVSWDRPLADIDGYMISYSSAE
GSSGEIPVGADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTPAETDLDAPTNLLTRE
VTEDTADVSWDRPLADIDGYMISYSSAEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWA
VKGSRVSRKSSTPAETDLDAPTNLLTREVTEDTADVSWDRPLADIDGYMISYSSAEGSSG
EIPVGADSSSYRLTGLRPGVIYTAYIWAVKGSRVSRKSSTPAETDLDAPTNLLTREVTED
TADVSWDRPLADIDGYMISYSSAEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWAVKGS
RVSRKSSTPAETDLDAPTNLLTREVTEDTADVSWDRPLADIDGYMISYSSADGSSGEIPV
GADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTPAETEIDSPKNLKASDVKLDAATL
TWNAPLARIDGYILTFRAEDGTLKTLEKKLRAGESRFAMSGLEMGKNYIVTLLAYRGAKR
SRVIETTFKTVGLLYPFPMDCTQIKTNGNMASGIYTIYINSDRTKPMEVYCDMDTDGGGW
VVLQRRNNGQMDFMKRWRQYMAGFGNMTDEFWLGLDNIYELTNTPTQYELRVDLGVGSEK
AYAVYDNFKIAPAKQKFKLTIGKYRGTAGDAMNYHQGRPFSTFDNDNDIALGNCAFTHRG
AWWYKNCHLANLNGKFGDNRHSMGVNWEPWKGHLMSLDFTEMKIRPVGAARKRRSLSSRT
APRK
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgactactagacttcactggctctcaagagccctctgcctgataggcatactgtgcact
gtcactaccacatatgtgacagaagattctccagcccccgttgagaaaggagtcaccttc
agccacatctataaaatagacctggccaagagccctgactgtaaattggccttgcagacc
atgcctcacctgcaggaccagggattaggtctgcaagagctggaggggggccctactctg
gagggggacaaggacatagtattcaggcaccaaatcaacctcaagaccccaaagtgtgac
tgtgatgagtcggagggcttcaagtctttgctgtacagagtcaacgggctggaggaggag
gtggaacacctgaagagtcagtgctcccagggctgctgtggtggcaaaggtggtggagca
ggaggtgtggacactagctgtagtggccacgggacctaccagcacgacacctgcagctgc
caatgtaaccctggctgggaaggcccagactgctctatctccacctgtcctgatgagtgc
aacgaccatggccgctgtgtggacgggaagtgtgtgtgccttgctggctacatggggagt
gactgcagccagctgatgtgcccaggcaactgcaacgataagggatactgcatggacggg
aagtgtgtgtgcttcagccacttcaccggcgaagactgcagcgtacagaaatgcagtcct
gactgcgtccacggcacctgtgtgaatggaatgtgtatctgtgacgagggcttctttggg
gatgattgctctgcagtgtttggccctaacggcctgcatctggtcagggtgactgatgtc
tcgctactggtagagtggcaggcggtgagagcagcagagtactatgtcttgacctggcac
cctgagggcaacgatgcagagctggagcgggtcaccgttcccaacacagagacctcctac
ctgatcaccggtcttaggccgggggtcacctacatagtgcaggtgtacgcggtcatcaag
gagatccagagcgagggagacaggatagaggcgaccacagtggtgtctggtattgatggt
atccgggtattgggccagactgaggactctatccaggtggactggcagaaccctgcagca
cctctggaccacttcagactgacccatgctaaccctgacgggcaggaggaggagcagatc
gtacctatgagtgcagaggccaggaccaccaacaccatcgtaggactgcaacctggcact
gagtacctcatcacagtgcaaggcatcaaaggcaccattgaggggaaagcctccttcgtc
accggggtcacagatcttgacactcctactaacctcttgaccaaagaagtgacagaggac
actgctaccgtggaatggcagaaggtacaagcagaaatcgacggctacgtgatcagctac
agctctgctgatggctccagtggggagatccctgtgggggcagacagcagctcctacagg
ctgactgggctgaggcctggagtcatctacacagtctacatctgggctgtcaagggctcc
cgggtcagcaggaagagctccacagaagctgagacagctctggatgctcctgctaacctg
ttgaccagagaagtgacagaggacacaacgacagtaacatgggaaaaagtccaggctgaa
atcgacggctatgtgatcagttacagctctgctgatggctccagtggggagatccctgtg
ggggcagacagcagctcctacaggctgactgggctgaggcctggagtcatctacacagtc
tacatctgggctgtcaagggctcccgggtcagcaggaagagctccacaccagctgagaca
gatctggatgctcctactaacctcttgaccagagaagtgaccgaggacacagccgatgtg
tcgtgggacagacctctagcggacatcgacggctacatgatcagctacagctctgctgag
ggctccagtggggagatccctgtgggggcagacagcagctcctacaggctgactgggctg
aggcctggagtcatctacacagtctacatctgggctgtcaagggctcccgggtcagcagg
aagagctccacaccagctgagacagatctggatgctcctactaacctcttgaccagagaa
gtgacagaggacacagccgatgtgtcgtgggacagacctctagcggacatcgacggctac
atgatcagttacagctctgctgagggctccagtggggagatccctgtgggggcagacagc
agctcctacaggctgactgggctgaggcctggagtcatctacacagtctacatctgggct
gtcaagggctcccgggtcagcaggaagagctccacaccagctgagacagatctggatgct
cctactaacctcttgaccagagaagtgacagaggacacagccgatgtgtcgtgggacaga
cctctagcggacatcgacggctacatgatcagttacagctctgctgagggctccagtggg
gagatccctgtgggggcagacagcagctcctacaggctgactgggctgaggcctggagtc
atctacacagcctacatctgggctgtcaagggctcccgagtcagcaggaagagctccaca
ccagctgagacagatctggatgctcctactaacctcttgaccagagaagtgacagaggac
acagccgatgtgtcgtgggacagacctctagcggacatcgacggctacatgatcagttac
agctctgctgagggctccagtggggagatccctgtgggggcagacagcagctcctacagg
ctgactgggctgaggcctggagtcatctacacagtctacatctgggctgtcaagggctcc
cgggtcagcaggaagagctccacaccagctgagacagatctggatgctcctactaacctc
ttgaccagagaagtgaccgaggacacagccgatgtgtcgtgggacagacctctagcggac
atcgacggctacatgatcagctacagctctgctgatggctccagtggggagatccctgtg
ggggcagacagcagctcctacaggctgactgggctgagacctggagtcatctacacagtc
tacatctgggctgtcaagggctcccgggtcagcaggaagagttccacaccagctgagaca
gaaattgattcgcctaagaacctaaaagcatcagatgttaagctggatgctgcgaccctg
acctggaatgctcccttagccagaatcgatggctacatcctcacattcagagctgaggat
ggcacgttgaagactttggagaagaagctgagggcaggagagagcaggtttgccatgtca
ggcctggagatgggaaagaactatattgttaccctcctcgcttacagaggagcaaagagg
agcagagtgatagagaccacgttcaaaacagtgggtttgttgtacccgttccccatggac
tgtactcagattaagacgaatggtaacatggcaagtggaatctacacgatttatatcaac
agtgatcgcaccaagcccatggaagtgtactgtgacatggacactgatggcggtggatgg
gtggtgttacaaagacgcaacaatggacagatggacttcatgaagcgctggagacagtac
atggctggctttgggaacatgactgatgagttctggctcggtctggacaatatctatgag
ctgactaatactcctacccagtatgagctgcgagtggacctgggcgtgggttcagagaag
gcctatgctgtctatgacaacttcaagatagccccagcaaagcagaagttcaagctgacc
attggcaaatacagaggaacagcaggtgatgccatgaactaccatcaaggtcgccctttc
tctacttttgacaatgacaatgacattgctcttggtaactgcgcctttactcatcgtggt
gcttggtggtacaagaactgtcaccttgccaacctgaacggcaaattcggagacaacaga
cacagcatgggtgtgaactgggagccatggaaaggccacctgatgtctcttgatttcact
gagatgaagatccggccagtgggcgccgccaggaagaggaggtcgcttagcagcagaaca
gctcccagaaaatag
DBGET
integrated database retrieval system
