KEGG   Salmo salar (Atlantic salmon): 106599404
Entry
106599404         CDS       T04363                                 
Symbol
tnr
Name
(RefSeq) tenascin R
  KO
K06252  tenascin
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106599404 (tnr)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106599404 (tnr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sasa00536]
    106599404 (tnr)
Glycosaminoglycan binding proteins [BR:sasa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106599404 (tnr)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_TEN EGF_Teneurin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N FN3_Tor_3rd Fn3_Dep-1_2nd Interfer-bind EGF_Tenascin EGF_2 DUF4998 Fn3_Dep-1_1st Fn3_ELFN
Other DBs
NCBI-GeneID: 106599404
NCBI-ProteinID: XP_014046086
UniProt: A0A1S3R146
LinkDB
Position
ssa03:22130155..22296119
AA seq 1369 aa
MGPARGWLLGLVLLLLGTQAALSPSGEEGKLVRTIRVRRQAPSDGPTSQSNNQTIKEQPM
VFNHVYNINVPLESLCSVDLDSAVPPPSQATRGAVSSGGGEGATEFREQTVDADSQVTFT
HRINIPKQACACSTANIVQQLAIRIEMLEREVLLLRAQCSSGSCGCGESSAMGHLDFIPQ
CSGHGSFKMDLCGCVCEDGWTGKNCSEPRCPDDCSGQGVCMEGECVCDRDFGGDNCSEPR
CPADCSGRGLCMDGECICEENFTGEDCTLGRCLNDCSDQGLCTNGTCQCRPGYVGEDCSL
AYCANNCSQKGICKEGFCVCQDGFAGEDCSAVAPALNLRMRGVTEHTIDLEWEGSVLMTD
YLVTYVATSPGGVQLEIRIPGNTTTCSIPDLEPGIEYNINVYAVLNNVISAPTNTQVSTY
LSNPDGLLFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGL
RPGEEYTVNLVALRDQGRSQPVSATVTTLIDGPTQMIVRDVSDSVAFVEWTNPKAKMDQI
VLRYGLVGEDMPKTTFRLQPTLSQYSLQMLRPGSRYEVSISGVRKGNESGTISTEFSTVL
MFLSEIDAPKNLRVLSKFSTALELEWDNSEAEVEGYQVVYSTLAGDQYEKVIVPLNDGPT
SKTTLTNLLPGTEYGIGISAMLGTNQSSPATMNARTGLDVPMDLTVTASTDNTITLLWGV
VQGPIDQYMVTYTSSSGLTTEVTVPKDVTTTTLNDLEPGTEYTITVTAQRGRQQSTAATI
DGFTGFRPIIALYLSDVTWDSVTVAWSAPSPPADLYILTYSSEDGTDTSKVTLDGSKTRS
SIKGLLPSTEYTVSLITIQGEVKSEAVTATLTTGMDPPKEMTVSYATEDSVIISWLRPFA
PFDYYKMSYQSERGTVDSVVIDNDVTNYTLSSLHPATEYEINLNVVRGSQESKSITTSVF
TAMDMPMELTALNITPQGALLRWNPPLSSVDNYVFTLTCNQVTANTFLVEGVKQEHQLSK
LKPSTTYSVALYATKGPLTSGTVIANFETPMDAPLNLTASEVNHRSALISWQPPIADIDN
YMLTYKSVDGNRKELILDAEDTWIRLEGLAETTEYTVRLQAARGLETSGIVSTAFTTGNR
LFATPQNCAQHLLNGESLNGVYTIYINRDANQGVQVYCDMTTDEGGWIVFQRRQNGLTDF
SRKWSDYRVGFGNLEDEFWLGLDNIQKLSAQGRYELRIDMKDGQESVYASYDKFAIGDAR
NLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNG
KYGESRHSQGINWYHWKGHEFSVPFVEMKMRPFNYRSISGKRRRSTPPE
NT seq 4110 nt   +upstreamnt  +downstreamnt
atgggccctgcacgaggctggctgctgggcctggttctactccttctggggacccaggct
gctctatccccgtccggtgaggaggggaagctggtccggaccatcagggtcagaagacag
gcaccttcagatggccccaccagccaatctaacaaccagaccatcaaggagcagccaatg
gtcttcaaccatgtgtacaacatcaacgtgcccctagagtctctgtgctccgtggatctg
gactcagcagtgcctccacctagccaggccaccagaggggctgtgtccagtgggggtggg
gagggcgccacggagttcagagagcagacagtggacgcagacagccaggtcaccttcacc
caccgcatcaacatccccaaacaggcctgcgcctgttctacagccaacatcgtgcagcag
ctggccatccgcatcgagatgctggagagagaggtgttgctgctgagagcccagtgcagc
tctggcagctgtggctgtggggagagttcagccatgggtcacctggacttcattccccag
tgcagtggccatggcagcttcaaaatggacctgtgtggttgtgtgtgtgaggacggctgg
acgggcaaaaactgctctgagcctcgctgcccagacgactgctccggacagggagtgtgt
atggagggcgagtgtgtgtgtgaccgtgacttcggaggggacaactgctcggagccccgc
tgcccggcggactgctccggtcgagggctgtgcatggatggggagtgtatctgtgaggag
aacttcactggggaggactgtacactgggtcgctgcctcaatgactgctctgaccagggg
ctgtgcaccaacggaacctgccagtgtcgcccgggatacgtaggagaagactgttccttg
gcctactgcgccaacaactgcagtcagaagggcatttgtaaagaaggcttctgtgtctgc
caagatggcttcgctggagaagactgctctgcagtggctccggctctgaacctgcgcatg
cggggagtgacggagcataccattgacctggagtgggaggggtcggtgttgatgacagac
tacctagtcacctacgtggccaccagcccaggtggggtccagctggagatcaggatccct
gggaacacaaccacctgcagtatcccagacctggagcctggcatcgagtacaacatcaac
gtctacgctgtgctcaacaacgtcatcagtgcccctaccaacactcaggtgtcaacctat
ctctcaaatccagacggtttactcttcaaatccatcacggagacatccgtggaggtgcag
tggcaacctttctactactcatttgatggctgggaaataagcttcattcccaaggacaat
gatggagggatgacagcccagctacccagcaccatcacttcgttccaccagacaggcctg
aggccaggggaggagtacaccgtcaacctggtagctctgagggaccaaggccgcagccag
cctgtatccgccaccgtcaccacattgattgatgggccgacacagatgatagtgcgtgat
gtctcggactcagtggccttcgtggagtggaccaatcccaaggccaagatggaccagata
gtgctgcgttatggcctggtaggagaggacatgcccaagactactttccgtctgcagccc
accctcagccagtactccctgcagatgctgaggccaggctcgcgctatgaggtgtccatc
agtggtgttcgcaagggcaatgagagtggaacaatctccacagaattcagcaccgttctg
atgttcctctcagagatcgacgcgcccaagaacttgcgagtgctgtccaagttctccacc
gccctggagctggagtgggacaacagcgaggcggaggtagaggggtaccaggtggtctac
agcaccctagcaggggaccaatacgagaaggtcattgtcccactcaacgatggacccacc
agcaagaccacactcacaaacttgttgccaggtacagagtatggcattggcatatcggct
atgcttggcaccaaccagagttctcctgccacaatgaacgccagaactggtctggatgtc
cccatggacctaactgtgacagcgtccacagacaacaccatcaccctgctgtggggggtg
gtccaggggcctatcgaccaatacatggtcacctacacctcctcatctggcctgaccacg
gaggtgaccgtccctaaggacgtgaccaccaccacgctcaatgatctggagccaggcaca
gaatataccatcactgtaactgcccagaggggaaggcagcaaagcactgcagccaccatc
gatggcttcacaggcttccgccccatcatagcgctctacttgtctgatgtcacgtgggac
tcggtgacggtggcatggagtgccccttccccacccgcagacctctacatcctcacctat
agctctgaggacggcactgacacctccaaggttaccctggacggatccaagacccggtcc
tctatcaaggggctcctgccctccacagagtacaccgtcagccttatcaccatacaggga
gaggtgaagtctgaggctgtcacagccacgctcaccacaggaatggatccacctaaagag
atgactgtgtcatatgccactgaagactccgtcatcatatcatggttgagaccattcgct
cccttcgactactacaagatgtcctatcaatcagaaagagggacagtggacagcgtggta
attgacaatgacgtcactaactacaccctatccagcctccacccagcaacagagtatgag
atcaacctgaacgttgtgcggggcagccaggagagcaagtccatcaccaccagtgtcttc
acagcgatggacatgccaatggaactaacagccctcaacattaccccacaaggagcttta
ctccggtggaaccctcctctgtccagcgttgacaactacgtgttcaccctcacctgcaac
caggtgacagctaataccttcctagtggaaggtgtgaaacaggagcaccagcttagtaaa
ctcaagcccagcaccacctactctgtagccctctacgccactaagggacccttgaccagt
ggaaccgtcatcgccaactttgaaacacccatggacgctcctctgaacctaacggctagc
gaggtgaaccaccgcagtgccctcatctcctggcaaccgcccatcgcagacatcgacaac
tacatgctcacatacaaatcagtggacggcaacagaaaggagctgatcctggatgctgag
gacacttggatccgtctggaggggctggcagagaccacagaatacactgtgaggttgcag
gctgccaggggattagagaccagcggaatcgtctctacggccttcacaacaggaaaccgt
ctgtttgccaccccccagaactgtgcccagcatctgctgaacggggagtccctcaatggc
gtctacaccatctacatcaacagagacgccaatcagggagtgcaggtctactgtgatatg
accacagacgaaggaggctggattgtgttccaacgtcgtcagaacggcctgacagacttc
tccaggaagtggagtgactacagggtcggctttggaaacctagaggatgaattctggctc
ggtttggacaacatacagaagctctcagctcaaggtcgctatgagctccggatcgacatg
aaggatggccaggagtctgtctacgccagctatgacaagttcgccattggagacgccagg
aatctatacaaactcaggataggagagtacaatggaacagctggggactcgctgagctat
caccaaggccgtcccttctccaccaaggacagagacaatgacatcgccgtgaccaactgt
gctctgtcctacaaaggagcctggtggtacaaaaactgccatcgggccaacctgaacggg
aaatacggcgagtcgagacacagtcagggtatcaactggtaccactggaagggccatgag
ttctctgtcccgtttgtggagatgaaaatgaggccgttcaactaccgcagcatcagtggc
aagcgaaggaggtccactcctccagaataa

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