Salmo salar (Atlantic salmon): 106599435
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Entry
106599435 CDS
T04363
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma 2
KO
K06246
laminin, gamma 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04382
Cornified envelope formation
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106599435 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106599435 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106599435 (lamc2)
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GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Adhesin_P1_N
RPN11_C
CAP_N-CM
Motif
Other DBs
NCBI-GeneID:
106599435
NCBI-ProteinID:
XP_014046146
UniProt:
A0A1S3R1X7
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Position
ssa03:complement(21119287..21134849)
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AA seq
1150 aa
AA seq
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MRILICLIPIRFSVTMKSSWIFLCGLYLCTWSSIQGTYRYGGSDICECSGKSRYCLHDSG
GLHCVDCQDNTEGRHCERCKEGFYHQRAGDSCLPCNCSPIGSVGAHCDSRGRCSCRAGTQ
GEKCDRCQNGTPISSNGCAANGGQLTDNSVTAQSLPCFCYGHSTECSTAKGYSVHTITST
FDDGPEGWRAATVHGVTPSQVHFRWSPTHHDIEVISKDILPVYLYAPDSYLGNQELSYGQ
NLSFSLRLDRGVRHPSMADVVLEGSGLSVAASLGDLQTIVPSGQKITYTFRLDEQQGSEW
RPRLSSFQFQTLLHNLTDIKIRGTFGENGRGYLDDVHMESARRGAGSPAAWVQKCSCPVG
YEGQFCEKCAAGYKRSSPSKGPYSSCEPCSCRGGSCDSETGDCYSADETPGRQTCPPGYY
NDPAQPQSCLKCTCPNGGACSVSPYSLEVKCDLCPPGTTGSRCHTCQDGFYGDPLGEDGI
QRPCRRCQCNGHMDPNTVRSCDPQTGECLQCLKHTTGLFCERCLEGYHHSMPSEACKPCG
CNSQGSLHNKCSDQGQCSCREGFEGLKCQRSACPSCFNLVKTEIEGYSRKLWEIETLFTG
MESGSLPVNDAQMEKAIRTAEDIVTDLQRNAQTLSESEKDLQARLSDISATQLSEGRDIQ
AISNTIDNIKLQDQKYQRQVSDVQTLISDVRRKLEEARFNIKQAEFPLGDAEAGTDTLSS
LVQRATDLAEKHQSKSGTVEKTANGALAKSEKSLALMRSVMTGENKIKELISDLKTKYDE
NSAQVKAMESLATRLSSSARDESRMAADTLEQIASLEPGIPRPLKKDIDSVLAKLDGLRE
RVEKNLTVYKALQEDTQEDKAAVEDLLAQGKAAQQKFDQLLDRANDAKADTELALKDITD
NIDGVDNVLEMLRGFDGQINKNKALADEAIKKLPGINATIHQAVGNNSETLFIIGSVSGD
YNDALDTVSSLESVVSRLEGMSGSLPVPPADLLKDATKLNEDVQGLQKQAVATVAKVAAE
RANAEIQKRRAAEASMGATGAYNNAKHTRDAVGETLLVINNLLSMIGKPGSVDEERLGEL
EQSITSARGQVNLQLQPRLQDLEEKEASQRTRLTGLNLDIDMILDDIRNLEDIHSNIPNG
CFNSPPIERP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttgatctgcttaattcccattcgattttctgtgaccatgaagagcagttgg
atatttctgtgtggactttatctttgtacctggtcgtctatccaaggaacctacagatat
ggaggatcagacatctgtgaatgcagtggaaagtcacgttattgcttgcatgactctggg
ggcctccattgtgtggactgccaagacaacactgagggaaggcattgtgagaggtgcaag
gagggattctaccaccagagggcaggagacagttgtctgccgtgtaactgcagccctata
ggttctgtaggcgcccactgtgacagtagaggacgctgcagctgtagagcgggaacacag
ggggagaaatgtgaccgatgtcagaatggaacacctatcagctcaaatggctgtgctgct
aatggtggccagctcactgacaactcagtgacagctcaatctctaccttgcttttgctat
ggacactcgactgagtgctccacagccaagggatactcagttcacacaatcacttcaacc
ttcgacgatgggccagaggggtggcgagctgccacagttcacggtgtgaccccgtctcaa
gtccacttccgctggtcccccactcatcatgacattgaggtcatctccaaagacatcctg
cctgtttacctctatgcccctgactcttacctgggcaaccaggagctgagctacggtcag
aacctgtccttctccctgaggctggaccgaggggttcgccatccgtccatggctgatgtg
gtgctggagggatctgggctgagcgtggcagcttccctgggagacctgcagaccatcgtt
cccagtggacagaagattacctacacattcagactggatgagcaacaaggcagtgaatgg
aggccccgcctttcatctttccagtttcaaacactcctccacaatctgactgacattaaa
atccgtgggacatttggagaaaatgggcgtggttaccttgacgacgtgcacatggagtct
gcccgtcgaggtgccgggtccccagctgcatgggtacagaaatgtagctgcccagtggga
tatgagggccagttctgtgagaagtgtgctgcagggtataaaagaagttccccaagcaaa
ggtccatacagctcctgtgagccctgcagctgtagaggtggaagctgtgactctgaaaca
ggagactgttactctgcagatgagacccctggtcgccagacctgcccgccagggtattat
aatgaccctgcccagccacagtcttgtctgaagtgtacctgtcccaatggaggtgcctgc
tccgtaagcccatattccctggaggtcaagtgtgacctctgtccacctggcaccactggc
tcacgttgccacacctgccaggatggtttctatggtgatcccttgggtgaagatggcatc
cagaggccatgtcggcgctgccagtgcaacgggcacatggacccaaacaccgtccgtagc
tgtgacccacagacaggggagtgcctgcaatgcctaaagcataccactggccttttctgt
gagaggtgtctggagggctatcaccacagcatgccatcagaggcatgcaaaccttgtggc
tgcaattctcagggctctctgcacaacaaatgcagtgaccagggccagtgttcttgcaga
gaaggctttgagggtctgaagtgccagcgttccgcatgtccctcctgcttcaaccttgtc
aagactgagatcgaggggtatagtcgtaaactatgggagatagaaactctgtttacgggc
atggagagtggcagtctgccagttaacgacgcccagatggagaaagccatcagaacagca
gaggacatagtcacagacctgcagagaaatgcacagacactctctgaatcagagaaagac
ttacaggcccggctctcagacatcagtgcaacccagctgagtgaaggcagagacatccag
gcaatctccaacaccattgacaacatcaagttgcaggaccagaagtaccaacgacaggta
tctgatgtccagacactcatcagcgatgtgcggcgcaaactagaagaggcaagattcaac
atcaaacaagctgaattccccttaggtgatgcagaggcgggcacggacaccctctcttct
ctggttcagagagcaacagacctggctgagaaacatcagagcaaatcggggacagtggag
aagacagcaaacggtgcccttgcaaagtcagagaagtccctggcactcatgagatcggtc
atgacaggggaaaacaagatcaaggagcttatcagtgatctcaaaaccaagtatgatgag
aactcagcccaggtgaaggccatggagagcctggccactcgcctgagcagctctgcccga
gatgagagcaggatggcggctgacactctggagcagatagcctccctggagccgggaatc
cctcgtcctctcaagaaggacattgacagtgtgttggctaaattggatggcctgagagaa
cgggtggagaagaacctaacagtgtacaaggcactgcaagaggacacccaggaggacaag
gccgcagtagaggatctcctagcccaggggaaggcagctcaacagaaatttgaccagctc
cttgacagagcaaatgatgcgaaggctgacacagaactggccctgaaggatatcacggat
aatattgatggggtggataatgtactggagatgctaagagggtttgatggccagatcaac
aagaacaaggcattggctgacgaggccataaagaagctccctggcatcaacgccaccatt
catcaagctgttggcaacaactcagagaccctattcatcataggcagtgtgtctggagac
tacaatgatgcactggacactgtcagcagcctggaatctgtggtctctcgactggaggga
atgtccggctctttaccagttcctcctgctgatctgttgaaggacgccaccaagctgaac
gaggatgtgcagggtctgcagaagcaggcagtggccactgtggccaaagtggcagcagag
agggctaacgctgagatacagaaacgcagagctgcagaggcttcaatgggagcaactggt
gcttacaacaatgccaagcacaccagagacgctgtgggagaaacactcctggtcatcaat
aaccttctgagcatgatcggtaaacctggcagtgtggacgaggagaggctaggggagttg
gagcagtccatcaccagcgctcgtggccaggtcaacctacagctccagcctcgactgcag
gacctggaagagaaggaggccagccagaggaccaggttgactggcctcaacctagatatt
gatatgatcctagacgacatcaggaacttggaggacatacactcgaacatccctaacggc
tgcttcaactccccacctattgagagaccttaa
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