Salmo salar (Atlantic salmon): 106599515
Help
Entry
106599515 CDS
T04363
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03271
Virion - Rotavirus
sasa04145
Phagosome
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04530
Tight junction
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
sasa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
106599515
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106599515
04514 Cell adhesion molecules
106599515
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106599515
09144 Cellular community - eukaryotes
04510 Focal adhesion
106599515
04530 Tight junction
106599515
09142 Cell motility
04820 Cytoskeleton in muscle cells
106599515
04810 Regulation of actin cytoskeleton
106599515
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106599515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106599515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106599515
04515 Cell adhesion molecules [BR:
sasa04515
]
106599515
04090 CD molecules [BR:
sasa04090
]
106599515
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106599515
Exosome [BR:
sasa04147
]
Exosomal proteins
Proteins found in most exosomes
106599515
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106599515
CD molecules [BR:
sasa04090
]
Proteins
106599515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
106599515
NCBI-ProteinID:
XP_014046268
UniProt:
A0A1S3R1N2
LinkDB
All DBs
Position
ssa03:complement(19008179..19029121)
Genome browser
AA seq
800 aa
AA seq
DB search
MDLRLLSIATLLGILCFCSAQQEGSDCIKANAQSCGECIQVAEKCGWCTDTDFLKQGESK
SARCDELQSLIMKGCTKAKIENPRGSTSINKNKPVTNRKKDMAEKLKADQITQIQPQKLT
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMKEVTSDF
HIGFGSFVEKTVMPYISTTPARLLNPCTNNDTCTSPFSYKNVLKLTEDGEEFNSLVSKQQ
ISGNLDSPEGGFDAIMQVAVCGEAIGWRNVTSLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDSYNSLSSEVILENGKLPEGVSITYKSICKDGWVGTGENGRKCSNISI
GDEVSFEIAIKSEKCPPKVNSEILTIKPLGFTENVEIVLNFICECECSKDGKPLSKMCHN
GSGIFECGACRCNEGRIGRLCECSTDEVRTDDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENPEERYSRKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDSSTC
LAANKQICNGRGTCECGVCKCTNPKFQGPTCEICPTCPGVCAEHKDCVQCQAFETGEKKD
TCKRDCSYFNLIRVKDRDKLPQPGDQSYPLSHCKERDANDCWFYYTYAVRNHTEREVYVV
DTLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNTKWDTG
VNPIYKSAVTTVFNPKYEGK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaggctgctttcaatagcaacattattaggaatcctctgtttctgcagtgca
cagcaagagggcagtgattgcatcaaggccaatgcacaatcatgtggggaatgcatccag
gtggcagagaaatgtggatggtgtacagacactgacttcctgaagcagggagagtctaag
tcagcacgctgtgatgagctacagtccctgatcatgaagggctgcactaaggccaagatc
gagaacccccggggcagcacctccatcaacaagaacaagcctgtcaccaaccgcaagaag
gacatggcagagaagctgaaggctgaccagatcactcagatccagcctcagaaactcacc
ctcaacctccgatccggtgaggcccagacctttaagttgaagttcaagagggcagaggac
taccccatcgacctctactacttgatggatctttccttctccatgaaagacgatttggag
aacgtcaagaatctggggactgacctgatgcgtgagatgaaggaggtcacctcagacttc
catatcggtttcggctcctttgtggagaagacagtgatgccatacatcagcactacccca
gccagactgctgaacccctgcaccaacaacgacacctgcacaagccccttcagctataag
aacgtgctgaagctgactgaggacggggaggagttcaacagcctggtcagtaagcagcag
atctctggaaacctggactcccctgagggaggattcgatgccatcatgcaggtggccgtc
tgtggggaggccattggctggaggaacgtcactagtctgctggtgttctccactgacgct
ggcttccactttgctggagacggcaagctgggcggcatcgttctgcccaacgatgggaag
tgtcatctggagaacaacatgtacaccatgagccattactacgactatccctccattgcc
catttggtccagaaactgagtgacaacaacattcagaccatttttgctgttactgaggaa
ttccagcctgtttacaaggaactgaagaacctcatccccaagtctgcagtaggaactctg
tcctccaactccagcaacgtcatcaagctcattatcgattcctacaactctctgtcatct
gaagtcattctggaaaacggcaagctgcctgaaggtgtatccataacatacaagtccatc
tgcaaggacggttgggttggaaccggagagaatggaagaaaatgctctaacatctccatt
ggagatgaggtgtcctttgagattgccatcaagtccgagaagtgtccgcctaaagtcaat
tccgagatccttacaatcaagcccctgggttttactgagaatgtggagatcgtcctcaac
ttcatctgcgaatgtgaatgttccaaagatggaaaacctctcagcaagatgtgccacaat
ggcagcgggatctttgagtgtggagcctgcaggtgcaacgagggccgtattggcagactg
tgtgagtgcagtacagacgaggtgaggacggacgacctggacgctaactgccggaaagac
aacggtaccgacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgtaaa
aagagagagaacccagaagaacgttacagtaggaagttctgcgagtgtgacaacttcaac
tgtgaccgctccaacaacaaactctgtggaggacatggacgttgtgagtgcagggtgtgt
atctgtgatgccaactacacgggcagcgcctgcgactgttccctggactcctccacctgc
ctggcagccaacaagcagatatgtaatggccggggcacctgcgagtgtggcgtctgcaag
tgcactaaccccaagttccagggtcccacctgtgagatctgccccacctgccccggagtc
tgtgctgaacacaaagactgtgttcagtgccaggcctttgagacaggagagaagaaggac
acgtgtaagagggactgcagctacttcaacctgatcagagtgaaggaccgggacaagctg
ccccagccaggcgaccagtcctaccccctatcccactgtaaggagagggacgccaacgac
tgctggttctactacacctacgccgtcaggaaccacacagagagggaggtctacgtggtc
gacactttggagtgtccagcaggtcctgacatcatccccatcgtggctggcgtggtggcg
ggcatcgtgctgatcggcctggccctcctcctcatctggaagctgctcatgatcatccac
gaccgcagggagtttgccaagttcgagaaggagaaaatgaacacgaagtgggacacggga
gtgaatcccatctacaagagtgccgtaacaactgttttcaatccaaaatacgagggcaaa
tga
DBGET
integrated database retrieval system