KEGG   Salmo salar (Atlantic salmon): 106599515
Entry
106599515         CDS       T04363                                 
Name
(RefSeq) integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03271  Virion - Rotavirus
sasa04145  Phagosome
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04514  Cell adhesion molecules
sasa04530  Tight junction
sasa04810  Regulation of actin cytoskeleton
sasa04820  Cytoskeleton in muscle cells
sasa05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    106599515
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106599515
   04514 Cell adhesion molecules
    106599515
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    106599515
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106599515
   04530 Tight junction
    106599515
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106599515
   04810 Regulation of actin cytoskeleton
    106599515
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    106599515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106599515
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106599515
   04515 Cell adhesion molecules [BR:sasa04515]
    106599515
   04090 CD molecules [BR:sasa04090]
    106599515
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    106599515
Exosome [BR:sasa04147]
 Exosomal proteins
  Proteins found in most exosomes
   106599515
Cell adhesion molecules [BR:sasa04515]
 Integrins
  Integrin beta subunits
   106599515
CD molecules [BR:sasa04090]
 Proteins
  106599515
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 106599515
NCBI-ProteinID: XP_014046268
UniProt: A0A1S3R1N2
LinkDB
Position
ssa03:complement(19008179..19029121)
AA seq 800 aa
MDLRLLSIATLLGILCFCSAQQEGSDCIKANAQSCGECIQVAEKCGWCTDTDFLKQGESK
SARCDELQSLIMKGCTKAKIENPRGSTSINKNKPVTNRKKDMAEKLKADQITQIQPQKLT
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMKEVTSDF
HIGFGSFVEKTVMPYISTTPARLLNPCTNNDTCTSPFSYKNVLKLTEDGEEFNSLVSKQQ
ISGNLDSPEGGFDAIMQVAVCGEAIGWRNVTSLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SSNSSNVIKLIIDSYNSLSSEVILENGKLPEGVSITYKSICKDGWVGTGENGRKCSNISI
GDEVSFEIAIKSEKCPPKVNSEILTIKPLGFTENVEIVLNFICECECSKDGKPLSKMCHN
GSGIFECGACRCNEGRIGRLCECSTDEVRTDDLDANCRKDNGTDICSNNGDCVCGTCECK
KRENPEERYSRKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDSSTC
LAANKQICNGRGTCECGVCKCTNPKFQGPTCEICPTCPGVCAEHKDCVQCQAFETGEKKD
TCKRDCSYFNLIRVKDRDKLPQPGDQSYPLSHCKERDANDCWFYYTYAVRNHTEREVYVV
DTLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNTKWDTG
VNPIYKSAVTTVFNPKYEGK
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggatctgaggctgctttcaatagcaacattattaggaatcctctgtttctgcagtgca
cagcaagagggcagtgattgcatcaaggccaatgcacaatcatgtggggaatgcatccag
gtggcagagaaatgtggatggtgtacagacactgacttcctgaagcagggagagtctaag
tcagcacgctgtgatgagctacagtccctgatcatgaagggctgcactaaggccaagatc
gagaacccccggggcagcacctccatcaacaagaacaagcctgtcaccaaccgcaagaag
gacatggcagagaagctgaaggctgaccagatcactcagatccagcctcagaaactcacc
ctcaacctccgatccggtgaggcccagacctttaagttgaagttcaagagggcagaggac
taccccatcgacctctactacttgatggatctttccttctccatgaaagacgatttggag
aacgtcaagaatctggggactgacctgatgcgtgagatgaaggaggtcacctcagacttc
catatcggtttcggctcctttgtggagaagacagtgatgccatacatcagcactacccca
gccagactgctgaacccctgcaccaacaacgacacctgcacaagccccttcagctataag
aacgtgctgaagctgactgaggacggggaggagttcaacagcctggtcagtaagcagcag
atctctggaaacctggactcccctgagggaggattcgatgccatcatgcaggtggccgtc
tgtggggaggccattggctggaggaacgtcactagtctgctggtgttctccactgacgct
ggcttccactttgctggagacggcaagctgggcggcatcgttctgcccaacgatgggaag
tgtcatctggagaacaacatgtacaccatgagccattactacgactatccctccattgcc
catttggtccagaaactgagtgacaacaacattcagaccatttttgctgttactgaggaa
ttccagcctgtttacaaggaactgaagaacctcatccccaagtctgcagtaggaactctg
tcctccaactccagcaacgtcatcaagctcattatcgattcctacaactctctgtcatct
gaagtcattctggaaaacggcaagctgcctgaaggtgtatccataacatacaagtccatc
tgcaaggacggttgggttggaaccggagagaatggaagaaaatgctctaacatctccatt
ggagatgaggtgtcctttgagattgccatcaagtccgagaagtgtccgcctaaagtcaat
tccgagatccttacaatcaagcccctgggttttactgagaatgtggagatcgtcctcaac
ttcatctgcgaatgtgaatgttccaaagatggaaaacctctcagcaagatgtgccacaat
ggcagcgggatctttgagtgtggagcctgcaggtgcaacgagggccgtattggcagactg
tgtgagtgcagtacagacgaggtgaggacggacgacctggacgctaactgccggaaagac
aacggtaccgacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgtaaa
aagagagagaacccagaagaacgttacagtaggaagttctgcgagtgtgacaacttcaac
tgtgaccgctccaacaacaaactctgtggaggacatggacgttgtgagtgcagggtgtgt
atctgtgatgccaactacacgggcagcgcctgcgactgttccctggactcctccacctgc
ctggcagccaacaagcagatatgtaatggccggggcacctgcgagtgtggcgtctgcaag
tgcactaaccccaagttccagggtcccacctgtgagatctgccccacctgccccggagtc
tgtgctgaacacaaagactgtgttcagtgccaggcctttgagacaggagagaagaaggac
acgtgtaagagggactgcagctacttcaacctgatcagagtgaaggaccgggacaagctg
ccccagccaggcgaccagtcctaccccctatcccactgtaaggagagggacgccaacgac
tgctggttctactacacctacgccgtcaggaaccacacagagagggaggtctacgtggtc
gacactttggagtgtccagcaggtcctgacatcatccccatcgtggctggcgtggtggcg
ggcatcgtgctgatcggcctggccctcctcctcatctggaagctgctcatgatcatccac
gaccgcagggagtttgccaagttcgagaaggagaaaatgaacacgaagtgggacacggga
gtgaatcccatctacaagagtgccgtaacaactgttttcaatccaaaatacgagggcaaa
tga

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