Salmo salar (Atlantic salmon): 106599618
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Entry
106599618 CDS
T04363
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106599618
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106599618
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
106599618
NCBI-ProteinID:
XP_014046383
UniProt:
A0A1S3R1Z5
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Position
ssa03:19992008..20006290
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AA seq
852 aa
AA seq
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MLSSFIGPMRFRDIGTTTSRDHGDTSSTSSVEVKENRDSRNQVDYSSILQPGHHQSSALC
TDISKRKTTVDCTMVPAHHPSDLYTDISRGLSRTTALQRKQPLVEGKDRLLYELQLICKR
TAHCLTSDSATTPSARWVGGRASRGSDATCQKTMMTSWSVTKKNALVHLNELRPGLQYEI
VSQTGPVHAPVFAVGVEVNGLRFEGRGPTKKKAKMRAAELALRSFIQFPNAHQAHITMGN
LNFINTTSPTDFTSDQADLVPDTLFKEFQPEAQEDQILNHRTGGKELQFEEPPAQGQLYR
TVKRGHELLSSIRNHGRLVRLTLDLMSSANQKRQRFGSSIVGELRPVALLNELMPGLRYI
CLTERKKGRPIRSFVMAVRVDRRVFEGCGRSKRLAKAEAAASALQDLFNISLGPERSISN
TASWAKSAQLPQCFAEYIFHLVREKHRELADCCCTTSQSHRRHKALAGIVMTRGFDLRRA
QVVSLGTGTKCISGECVSDQGWAVNDCHAEVTTRRAFLRFLYAQLELLLCNRPGSLEQSI
FVRDKESVFRLRDGILFHMYVSSSPCGDARLNCPYEITATHQSGYRFVRKLRCHLRMKME
GGEGTLPVSILRANQKWDRGLPREPPVTMSCTDKIARWNILGLQGSLLSHLVEPVYLHSL
TVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNRLLLGCLSSSEGRQSGKSPSFSVNWSAG
DGELEVVDVSTGRKDSGTPSRLCKRSFFSRWERLHHQLSSPGGVLDAEEAHFLISDSTTT
LSARSVEGRVLPRSDATCRKTMEEAMKTYCGAKMAAGAYQRARQTFVVSLQEAGLGIWNR
KPPEQEHFQSRV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcatctttcatcggccccatgaggtttagagatattgggacaacaacatcaaga
gaccatggagacacttcaagtaccagcagcgttgaggtgaaggagaaccgcgacagcaga
aaccaagtggactattcctccatactacaacctggacatcatcaatcatcagctctttgc
actgacatctccaaaagaaagacaacagtggactgtaccatggtacctgcacatcatcca
tcagatctttacactgacatctccagagggctctccaggactactgctctacagaggaag
cagcctttggtggaaggaaaagacaggcttctctacgaactccagttgatctgtaagagg
acggcccattgtctcacatcagatagcgccacgactccgtctgcacggtgggttggggga
cgagcgtcgcgtgggagtgatgccacctgtcagaagacaatgatgacttcctggtctgtc
acaaagaagaatgccctggtgcatttgaatgagctgagaccaggtctacagtatgagata
gtgtctcagacagggccagttcacgcccctgtgttcgctgtaggagtagaggtcaacggt
ctcaggttcgagggccgaggccccaccaagaagaaggctaagatgagggcagcagagctg
gctcttaggtccttcatccagttccccaacgcccatcaggctcacatcaccatgggaaac
ctcaacttcatcaacaccacatcaccaacagacttcacctcagatcaggccgatctcgtc
cccgacacgctcttcaaggagtttcagccagaagcacaggaagaccaaatccttaatcac
agaacagggggaaaggagttgcagtttgaggagccaccagcacaaggacaactctacaga
acagtgaaaaggggacatgagttgctctccagtatccgtaaccatgggagactagtgcgc
ctgacccttgacctgatgtcctcagccaatcagaagaggcagcggttcggttcctctatc
gtcggggaactgaggcccgtggctctgctcaatgagttaatgccaggcttgaggtacatc
tgcctgacagagagaaagaaaggcaggccgatcaggagctttgtgatggcagtacgggtg
gatagaagggtatttgagggctgtgggcgcagtaagaggctggctaaagccgaggcagca
gcctcagcactacaggacctgtttaacatcagtctaggtcctgagaggagcatcagcaat
actgccagctgggccaagagcgcacagctacctcagtgctttgcagagtatatcttccac
ttggtgagagagaaacaccgtgagctggctgactgttgctgcactacctcccagtcgcac
agacgtcacaaagcactggcaggcatcgtaatgaccagaggttttgatctgaggcgagcc
caggtggtgtctttggggacagggaccaagtgtatcagtggagagtgtgtcagtgaccag
ggatgggcggttaatgactgccatgctgaggtcaccaccaggagggctttcctccgcttc
ctctatgcccaactggagcttctcctctgcaaccggccaggcagtttggagcagtcgatt
tttgtgcgagacaaagagtcagtattcagactgagagacggtattctgttccatatgtat
gtgagttcatcgccctgtggggacgcacgcctcaactgtccctacgagatcacagctaca
caccagagcgggtacagatttgtgaggaagttgcgctgccatctgaggatgaagatggaa
ggcggtgagggtacacttcctgtcagcatactgagagccaatcagaaatgggacaggggg
ttgccgagggaacctcccgtcaccatgtcctgcacagataaaattgccaggtggaatatt
ctaggtctccagggctctctcctgtctcacctggtggagccggtgtacctccacagcctc
acagtgggcagcctgtgccacacgggtcacctgggaaggaccatggcacgacgcatgggg
cacatcgcccctctgccctcgtcctatagacgcaacaggctactgctcggctgcctcagc
agcagtgagggtcggcagtcagggaagtcccccagcttcagtgtgaactggagtgctgga
gacggagagctggaggtggtggatgtctccacaggcaggaaagactcagggacaccatcc
agactctgcaagagatccttcttcagtcgctgggagagactacaccaccagctgagcagt
ccaggaggagtattggatgcagaggaggcccattttcttatttcagatagcacaacgact
ctgtctgcacggtcggtggagggacgagtgttgcctaggagtgacgccacctgtcggaag
acaatggaggaggccatgaagacgtactgtggagctaagatggcagcaggggcctaccag
agagccaggcagacgtttgtcgtctcactgcaggaggcaggtctgggcatctggaacagg
aaaccaccagaacaggagcatttccagagcagggtgtga
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