Salmo salar (Atlantic salmon): 106599822
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Entry
106599822 CDS
T04363
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106599822
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106599822
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106599822
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106599822
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106599822
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106599822
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106599822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
106599822
NCBI-ProteinID:
XP_014046635
UniProt:
A0A1S3R2P5
LinkDB
All DBs
Position
ssa03:complement(30985375..31005238)
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AA seq
1636 aa
AA seq
DB search
MKLYVFQVNNGSTLAFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYINYQQ
DFEDIKLKLTRLGTAVSVMAKIPLLECLTRHSYKECIEKSCSTPNKDSDETVEEKSTDSV
LCPTPTKLPASFSAPGAGCSPDTAEGQESSEMTDSSGLRAALQEADSPERVNPLSFNVTL
LDWINVQDRPNDVESVVRKCFDSINRLDPRVIQPFLAECRDTIAKLDNQNMKAIKGLEDR
LYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIMLTNHR
KLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRVVDA
LSTVPQMYCLAVVEVVRRKLFIGHYREWACALVKDGKHLYETEKYKRETFGKLFRKSFLR
NRLFRGLDSWPPTSFCTRKPRKFDFELPDISLGDLQYLKTCCPTEVQPFLRVPTLCDFEP
LHLHVEMLQQLVLASQAASVDEMSQTITDLLSEQRGSCSQSAQRSTAAVTPRSDSTPGTS
SSKTPSSLSLPGPPCQPLPGPTALEDLSPDSIDAQTFDFETIGHPNMDPVLQQAGSLDLD
SLAESPESDFLSAVNEFVIENSPTPISDPTSPEMMVESLYSSVINAIDSKRMHDTTTLER
ENSKVAMLKLSIEKYCSAAEESQANLRSVKDDLYRFRGLVLKEQRDFGFALKTMTIDVRN
MVDTIRKREEEELREQHQAELLSVQQDHKKQLQALTEENRVNRNIVKDVQRAMLELEGLL
ERKEKELTQLEAERQRWTEAESGHTQRLRVLEQKISDQAQEVLTVAASRDSLYSQLETLH
IEIERGQQKIRQELEGAEQSHLQELEERMRQQHQAQLDTLARENQEAMECLATVNRVKLS
EVADRHAASLTERDGQLRDLEARATELADLRCKLEVELALKESEMEVVRLLYEEAKQGQQ
EANVRKATVEAETQSLNEELVQVNGQLQAKNEEYEKGLAELRMLMRMEKDQCISELVGRH
EEERNQHRSELTTLQQQAQDAGRSHAEQLQNLQLDLDLQTAALLNDKEVQQRRFEEQEQH
LRTVICDLQTENDLLTKRLEQDTQAAQERLEKEESLKAAVPDAFKDFEQQKEEMEKRLLD
KIRQLENELQERQSSEREAGLSKVQTEGRGSEAGAPLSLDSALQEHLQQETASLHTQLEL
LERRKDEEMQNLKTSLIAEQQTNFNTVLMREKLKKEQIISDLTEELRKVTQQQEKDKGLI
EMLSEDRAIVMQEKKQLEEELNRLRGTALVSSAYYSPNPLALEPTGAGARLGPGAFPGPG
TEVEVGAGACSSELFPDPDRLASVAATREDDRVDSAVEASMVTVHDNILMMSEEKQRILL
LERTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLF
TVGPTLYFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPL
GTKFYRVKAVPWNKKV
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggaagcactctggcatttgacacagagctt
gctgtccaaacagtgttggacctcaaacatgccatccaggtcaaatacaagattgcaacc
cagcatcaagttctggttgtcaatggaggggagtgtatggttgcagagaggagagtctgc
agctacagtgccggcactgacaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggctccgacgatccctaaaaccaccttctctattgagaatgagatggagctc
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctcgcgaacacaa
cttgctgtggaaatgtttgaagtcgccaagaaactttgctctttctgcgaacgcctggtt
cacgatgaacacctccaacaccaaggttgggctgccatcatggccaacctggatgactgc
accctgtcttatcagaagctactgtggaaatttgacacggcgtacattaattatcaacaa
gactttgaggatatcaaattgaaactgacaagactggggacagcagtttcagtcatggcc
aagatccccctgctggagtgtctgacccgccacagctacaaagaatgcatagagaagtcc
tgctccactccaaacaaggactctgacgagaccgtggaggagaagtccaccgactcggtg
ctctgccccacccccaccaagctacctgcatcgttctctgctccgggggctgggtgctcg
cccgacaccgccgaaggccaggaaagcagtgagatgacggacagtagtgggctgagggca
gccctgcaagaggcagactctccagagagggtcaaccccctgtccttcaacgtcacactg
ctggactggatcaacgttcaagacaggcccaatgacgttgaatcagtcgtgaggaaatgc
tttgactccatcaataggctcgacccacgggtcattcaaccattcttagcggaatgtcga
gacacgattgccaaactggataatcagaacatgaaagccatcaaaggacttgaggacagg
ttatacgctctagaccaaatgatagcgagctgtaaaaagttggtcaatgaacagaaggaa
cttgctcagggatttctggccaatcagaagcgtgctgagaacctgaaggatacgtccgtg
ctgcctgacctgtgtctcagtcacgccaatcagctgatgatcatgctgaccaaccacagg
aagctgctggacatcaaacagaagtgcaccactgccaaacaggagctggcgaacaaccta
caagttcgtctcaaatggtgctgctacgtgatgctgcacgcggaccaggatggggagaag
ctgcaggccctgctgaggctgctgaccgagctgatggagagagtccgggtggtggacgcc
ctcagcaccgtgcctcagatgtactgcctggctgtggttgaggtggtccgcaggaagctc
ttcatcggccactacagagagtgggcctgtgctctggtgaaggatggaaagcatctctat
gagactgagaagtataaaagggaaacgtttggcaagttgttcaggaaatcttttctccga
aatcggttgtttagaggacttgactcatggccccccacttcattttgcacaagaaagccc
agaaagtttgactttgagcttccagatatttcccttggtgacctgcagtacttaaagacc
tgttgtcctacagaggtgcagcctttcctcagggttccaacactgtgtgattttgagcct
ttgcatctgcatgtggagatgcttcagcagttggtccttgcttctcaagctgcaagtgtg
gacgagatgtctcaaactatcaccgatttactgagcgaacaaagggggtcgtgcagccag
agtgctcagagatccacggcagcggttaccccacggtccgacagcaccccagggacttcc
tcctccaagaccccctcttctctcagtctcccggggcccccctgccagcccctccctggc
cccaccgccctggaggacctgtccccggacagcatcgatgcccaaacttttgacttcgag
acaattggccaccccaacatggaccccgtcctgcagcaggctggctccctggacctggac
tccctggctgagagccccgagtcagacttcttgtcggcggtcaacgagtttgtgatcgaa
aactcgcccacccccatcagcgaccccaccagcccagagatgatggtggagtcgctgtac
tcgtcggtcatcaacgccatcgacagcaagcgcatgcatgacaccaccaccttagagagg
gaaaactccaaggtggctatgctgaagctgagcatcgagaagtactgctctgctgccgag
gagtcccaggccaacttgcggagcgtcaaggatgacctgtaccgcttcagaggcctggtg
ctgaaggagcagcgagactttggcttcgccctgaagaccatgaccattgacgtgcgcaac
atggtggacaccatccgtaagagggaggaggaggagctgagggagcagcaccaggccgag
ctcctctctgtgcagcaggaccacaagaagcaacttcaggccctgacggaggagaaccgg
gtgaaccggaacatcgtgaaagacgtgcagcgggccatgctggagctggaggggctgctg
gagcgcaaggagaaggagctgacccagctcgaggctgagaggcagcgctggaccgaggcg
gagagcggacacactcagaggctcagggtcctggagcagaagatcagcgatcaggcccaa
gaggtgctgactgttgctgcctccagagactccctgtacagccagctggagacactccac
attgagatcgagcgcggccagcagaagatccgccaggagctggagggggccgagcagtcc
cacctgcaggagctggaggagaggatgaggcagcagcaccaggcccagctagacaccctg
gcccgggagaaccaggaggccatggagtgcctggcaacggtgaacagggtcaagctgagt
gaggtcgcagaccgccacgccgcctctctgacagagagggacggccagctgagggatctg
gaggcccgggcaaccgagctggctgacctacgctgcaagctggaggtggagctggccctg
aaggagtcagagatggaggttgtgaggctgctctacgaggaggccaagcaggggcagcaa
gaagccaatgtgaggaaggccactgtagaggcagagacccagtccctcaacgaagagcta
gttcaggtcaatgggcagctgcaagctaagaacgaagagtacgagaagggcctggccgag
ctccggatgctgatgcgcatggagaaagaccagtgcatctcggagctggtgggaaggcac
gaggaagagaggaaccagcaccgcagcgagctgaccaccctgcagcagcaggcccaggat
gcaggaaggagccatgcagaacagctgcagaacctccaactagacctcgacctgcagacg
gcagcactgctcaacgataaggaagtgcagcagaggaggtttgaggagcaggagcaacac
ttgaggactgttatctgcgatttgcagacagaaaatgatctgctcaccaaaagattagag
caggacacccaagcagcccaggaacgtttggagaaagaggagtccttgaaggctgcagta
ccagatgccttcaaagactttgagcaacaaaaggaggagatggagaaaagacttctagac
aaaattagacaacttgaaaatgagcttcaggaaagacaatcctcagaaagagaggcaggg
ttgtcgaaggtgcagacagagggtcggggatccgaagcaggagctcctctctccctggac
tctgccttgcaggagcatctgcagcaggagacagcctccctgcacacccagctggagctc
ctggagaggaggaaggacgaggagatgcagaacctcaagacctccctcatcgcagaacaa
cagactaacttcaacactgttctgatgagagagaagctgaaaaaggaacagatcatcagt
gacctgacagaggagctgcggaaggttacccagcagcaggagaaggacaaaggtctgata
gagatgctgtctgaggaccgggccatcgtcatgcaggagaagaagcagttggaggaggag
ctgaaccggctgcgcggcacagccctggtatcctctgcctactacagccctaacccctta
gctctagagcccactggagccggggctagacttggacctggagcatttcctggacctggg
actgaagttgaggttggggctggagcctgctcctcagagctcttccctgacccagacaga
ctggcctctgtggctgccaccagagaggacgacagagtggactcggctgtggaggccagc
atggtgactgtgcacgataacatcctgatgatgtcggaggagaaacagcggatactgtta
cttgagaggactttacatatgaaggaagaagaaaacaagcgcctcagtcaaagactgatg
tctcaaagcatgtcctcggtgtcatcacggcattctgagaaaattgccatcagagatttc
caggttggcgacttggttctgatcatcctagatgaaaggcatgacaactatgtgctattc
accgtgggtcccaccctgtactttctccactctgagtccctcacggcattggacctcaaa
ccagatcctatgtttacttcagcatcaggagcctcgagacggccgtgggttcttggaaaa
gttatggagaaagaatattgccaggcgaaaaaggctcaaaaccggttcaaagttcctttg
ggcaccaagttctacagggtgaaagctgttccgtggaacaagaaagtatag
DBGET
integrated database retrieval system
